BLASTX nr result
ID: Bupleurum21_contig00032760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00032760
(494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|2... 168 5e-40
ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containi... 167 6e-40
emb|CBI18900.3| unnamed protein product [Vitis vinifera] 167 6e-40
emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera] 166 1e-39
ref|XP_002510616.1| pentatricopeptide repeat-containing protein,... 161 6e-38
>ref|XP_002301939.1| predicted protein [Populus trichocarpa] gi|222843665|gb|EEE81212.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 168 bits (425), Expect = 5e-40
Identities = 74/160 (46%), Positives = 114/160 (71%)
Frame = -2
Query: 484 RMIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMS 305
RM FEMG +PNEVT++ ++ +C +G G C+HG+A+K G+L +VKV++SLIN+YG
Sbjct: 129 RMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKC 188
Query: 304 GYMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSL 125
G +++AC LFE M V++LVSWNS++ +H G E+GI + MRRAG++ DQAT+V+ L
Sbjct: 189 GCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLL 248
Query: 124 QGCKDICIGNLVDAMHGYIITTGFDEDIIIMTTLISIYTK 5
C+++ + L +A+HGYI+ G D ++ I T L+ +Y K
Sbjct: 249 LACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAK 288
Score = 68.6 bits (166), Expect = 5e-10
Identities = 35/122 (28%), Positives = 62/122 (50%)
Frame = -2
Query: 481 MIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSG 302
M+ G ++ T+VS++ +C +G VHG L GL ++ + +L+++Y G
Sbjct: 231 MMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLG 290
Query: 301 YMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSLQ 122
+ +C +F M+ + V+W +++ +A +G G E I + M R GV PD T L
Sbjct: 291 TLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLS 350
Query: 121 GC 116
C
Sbjct: 351 AC 352
>ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 167 bits (424), Expect = 6e-40
Identities = 77/162 (47%), Positives = 114/162 (70%)
Frame = -2
Query: 490 FRRMIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYG 311
F RM E G +PNEVT++S++ +C +MG EG +HG+ +K+G+ KV++SLINMYG
Sbjct: 208 FCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYG 267
Query: 310 MSGYMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVT 131
G++D+A LFE M VR+LVSWNS++ IH NG+ E+G++ M+RAG++PDQAT+V
Sbjct: 268 KLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVA 327
Query: 130 SLQGCKDICIGNLVDAMHGYIITTGFDEDIIIMTTLISIYTK 5
L+ C D +G +++H YI GF+ DIII T L+++Y K
Sbjct: 328 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 369
Score = 61.2 bits (147), Expect = 8e-08
Identities = 29/117 (24%), Positives = 60/117 (51%)
Frame = -2
Query: 466 GTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSA 287
G P++ T+V+++ +CT+ G + +H + G D+ + +L+N+Y G ++++
Sbjct: 317 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 376
Query: 286 CYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSLQGC 116
+FE + R+ ++W +++ +A + G E I M + GV D T L C
Sbjct: 377 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 433
Score = 59.3 bits (142), Expect = 3e-07
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = -2
Query: 445 TIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSACYLFETM 266
++V I SCT + +H +K D + L++MY GY + A LF+ M
Sbjct: 124 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 180
Query: 265 LVRNLVSWNSLIKIHARNGFGEEGIN-FVKSMRRAGVSPDQATIVTSLQGCKDICIGNLV 89
++LVSWNSL+ + G+ +N F + +G P++ T+++ + C D+ +
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 88 DAMHGYIITTGFDEDIIIMTTLISIYTK 5
++HG ++ G ++ +LI++Y K
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGK 268
>emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 167 bits (424), Expect = 6e-40
Identities = 77/162 (47%), Positives = 114/162 (70%)
Frame = -2
Query: 490 FRRMIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYG 311
F RM E G +PNEVT++S++ +C +MG EG +HG+ +K+G+ KV++SLINMYG
Sbjct: 151 FCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYG 210
Query: 310 MSGYMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVT 131
G++D+A LFE M VR+LVSWNS++ IH NG+ E+G++ M+RAG++PDQAT+V
Sbjct: 211 KLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVA 270
Query: 130 SLQGCKDICIGNLVDAMHGYIITTGFDEDIIIMTTLISIYTK 5
L+ C D +G +++H YI GF+ DIII T L+++Y K
Sbjct: 271 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 312
Score = 61.2 bits (147), Expect = 8e-08
Identities = 29/117 (24%), Positives = 60/117 (51%)
Frame = -2
Query: 466 GTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSA 287
G P++ T+V+++ +CT+ G + +H + G D+ + +L+N+Y G ++++
Sbjct: 260 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 319
Query: 286 CYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSLQGC 116
+FE + R+ ++W +++ +A + G E I M + GV D T L C
Sbjct: 320 EDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 376
Score = 59.3 bits (142), Expect = 3e-07
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Frame = -2
Query: 445 TIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSACYLFETM 266
++V I SCT + +H +K D + L++MY GY + A LF+ M
Sbjct: 67 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 265 LVRNLVSWNSLIKIHARNGFGEEGIN-FVKSMRRAGVSPDQATIVTSLQGCKDICIGNLV 89
++LVSWNSL+ + G+ +N F + +G P++ T+++ + C D+ +
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 88 DAMHGYIITTGFDEDIIIMTTLISIYTK 5
++HG ++ G ++ +LI++Y K
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGK 211
>emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 166 bits (421), Expect = 1e-39
Identities = 77/162 (47%), Positives = 113/162 (69%)
Frame = -2
Query: 490 FRRMIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYG 311
F RM E G +PNEVT++S++ +C MG EG +HG+ +K+G+ KV++SLINMYG
Sbjct: 228 FCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYG 287
Query: 310 MSGYMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVT 131
G++D+A LFE M VR+LVSWNS++ IH NG+ E+G++ M+RAG++PDQAT+V
Sbjct: 288 KLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVA 347
Query: 130 SLQGCKDICIGNLVDAMHGYIITTGFDEDIIIMTTLISIYTK 5
L+ C D +G +++H YI GF+ DIII T L+++Y K
Sbjct: 348 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 389
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/117 (24%), Positives = 60/117 (51%)
Frame = -2
Query: 466 GTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSA 287
G P++ T+V+++ +CT+ G + +H + G D+ + +L+N+Y G ++++
Sbjct: 337 GINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNAS 396
Query: 286 CYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSLQGC 116
+FE + R+ ++W +++ +A + G E I M + GV D T L C
Sbjct: 397 EDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSAC 453
Score = 57.8 bits (138), Expect = 9e-07
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Frame = -2
Query: 445 TIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSACYLFETM 266
++V I SCT + +H +K D + L++MY GY + A LF+ M
Sbjct: 144 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 200
Query: 265 LVRNLVSWNSLIKIHARNGFGEEGIN-FVKSMRRAGVSPDQATIVTSLQGCKDICIGNLV 89
R+LVSWNSL+ + G+ +N F + +G P++ T+++ + C + +
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 88 DAMHGYIITTGFDEDIIIMTTLISIYTK 5
++HG ++ G ++ +LI++Y K
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGK 288
>ref|XP_002510616.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551317|gb|EEF52803.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 390
Score = 161 bits (407), Expect = 6e-38
Identities = 72/161 (44%), Positives = 113/161 (70%)
Frame = -2
Query: 493 MFRRMIFEMGTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMY 314
+F +M ++ +PNEVT +S+I +CT+ G G G VHG A+K+G + +VKV+++LI +Y
Sbjct: 131 VFSKMKYQTILKPNEVTFISLISACTDAGALGMGKYVHGFAVKLGTILEVKVVNALICLY 190
Query: 313 GMSGYMDSACYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIV 134
G SG +D+AC +FE M V+NLVSWNS+I +H + GF ++G+ + MRRAG+ DQAT+V
Sbjct: 191 GKSGCLDAACRIFEEMQVQNLVSWNSIIAVHVQRGFAQDGLRYFIVMRRAGIVSDQATLV 250
Query: 133 TSLQGCKDICIGNLVDAMHGYIITTGFDEDIIIMTTLISIY 11
LQ C+ + + LV+A+HGYI G + ++ + T L+ +Y
Sbjct: 251 ILLQACESVGLRKLVEAIHGYIFGCGLNMNLAVETALLKLY 291
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/117 (25%), Positives = 58/117 (49%)
Frame = -2
Query: 466 GTEPNEVTIVSMIWSCTEMGGFGEGVCVHGLALKMGLLCDVKVIHSLINMYGMSGYMDSA 287
G ++ T+V ++ +C +G +HG GL ++ V +L+ +Y G + ++
Sbjct: 241 GIVSDQATLVILLQACESVGLRKLVEAIHGYIFGCGLNMNLAVETALLKLYANLGMLSAS 300
Query: 286 CYLFETMLVRNLVSWNSLIKIHARNGFGEEGINFVKSMRRAGVSPDQATIVTSLQGC 116
+F M+ ++ V+W +++ +A +G G+E I + M R G PD T L C
Sbjct: 301 HKVFREMVNKDAVAWTAMLACYAVHGCGKEAIELFELMVREGAVPDHVTFTHLLSAC 357