BLASTX nr result
ID: Bupleurum21_contig00032758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00032758
(749 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi... 246 3e-63
ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi... 245 6e-63
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera] 245 6e-63
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat... 232 7e-59
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi... 232 7e-59
>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 246 bits (629), Expect = 3e-63
Identities = 116/175 (66%), Positives = 140/175 (80%)
Frame = +3
Query: 6 QHGCAYQAIELFKDMLQEGIAPSNITFVSVLSACSHTGRVDEGFYYFNSMSEQHNLNPDH 185
QHGCA +AI+LF++ML EG+ P ITFVSVLSACSHTG++D+GF YFNSM+ HN+ P
Sbjct: 478 QHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGL 537
Query: 186 EHYACMVDLLSRAGRLSEAKKFVKSMPIEPGVSVWGALLGACDRFSNLELGVEVAERLFE 365
EHYACMVDLL R GRL EA +F++SMP EP VWGALLGAC + +N+E+G EVAERLF+
Sbjct: 538 EHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFK 597
Query: 366 IEPNNPGNYILLSNIYTRSGRLKEASEVRRLMGSKRVSKETGCSWID*KEQHTCF 530
+EP+NPGNY+LLSNIY R G L+EA EVRRLMG V KE+GCSWID K + F
Sbjct: 598 LEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVF 652
Score = 75.9 bits (185), Expect = 9e-12
Identities = 39/89 (43%), Positives = 60/89 (67%)
Frame = +1
Query: 481 KRPGAAGLTKRSNTRVFTTNDRSINRSNEIYETLKMIEKLGKKK*YVAQTENAVSVVKVD 660
K G + + ++ T VF NDRS +R+ EIY L+ +++L K++ YVA+T+ A + V+
Sbjct: 636 KESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGS 695
Query: 661 KEQRLWHHSKRLALAFGLLTFP*VTPSRM 747
+EQ LW HS++LALAFGLL P +P R+
Sbjct: 696 EEQSLWCHSEKLALAFGLLVLPPGSPVRI 724
>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 245 bits (626), Expect = 6e-63
Identities = 118/176 (67%), Positives = 141/176 (80%)
Frame = +3
Query: 3 QQHGCAYQAIELFKDMLQEGIAPSNITFVSVLSACSHTGRVDEGFYYFNSMSEQHNLNPD 182
Q HGCA Q IELF+ ML EGI PS++TFV VLSACSHTGRV+EG +FNSM + H++NP
Sbjct: 290 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 349
Query: 183 HEHYACMVDLLSRAGRLSEAKKFVKSMPIEPGVSVWGALLGACDRFSNLELGVEVAERLF 362
EHYACMVDLL RAG L EAK+F++SMP++P SVWGALLGAC ++ NL++G E AERLF
Sbjct: 350 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 409
Query: 363 EIEPNNPGNYILLSNIYTRSGRLKEASEVRRLMGSKRVSKETGCSWID*KEQHTCF 530
E+EP NPGNY+LL+N+ TRSGRL+EA+EVRRLMG V KE GCSWID K F
Sbjct: 410 EMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVF 465
Score = 82.4 bits (202), Expect = 9e-14
Identities = 44/90 (48%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = +1
Query: 481 KRPGAAGLTKRSNTRVFTTNDRSINRSNEIYETLKMIEKLGKKK*YVAQTENAVS-VVKV 657
K PG + + ++ T VFT +DRS + S+EIY+ L+ +EKL KKK YVA+TE + + +
Sbjct: 449 KEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEEN 508
Query: 658 DKEQRLWHHSKRLALAFGLLTFP*VTPSRM 747
++EQ LW+HS++LALAFGLLT P +P R+
Sbjct: 509 EEEQGLWYHSEKLALAFGLLTLPIDSPIRI 538
>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 245 bits (626), Expect = 6e-63
Identities = 118/176 (67%), Positives = 141/176 (80%)
Frame = +3
Query: 3 QQHGCAYQAIELFKDMLQEGIAPSNITFVSVLSACSHTGRVDEGFYYFNSMSEQHNLNPD 182
Q HGCA Q IELF+ ML EGI PS++TFV VLSACSHTGRV+EG +FNSM + H++NP
Sbjct: 525 QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPG 584
Query: 183 HEHYACMVDLLSRAGRLSEAKKFVKSMPIEPGVSVWGALLGACDRFSNLELGVEVAERLF 362
EHYACMVDLL RAG L EAK+F++SMP++P SVWGALLGAC ++ NL++G E AERLF
Sbjct: 585 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 644
Query: 363 EIEPNNPGNYILLSNIYTRSGRLKEASEVRRLMGSKRVSKETGCSWID*KEQHTCF 530
E+EP NPGNY+LL+N+ TRSGRL+EA+EVRRLMG V KE GCSWID K F
Sbjct: 645 EMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVF 700
Score = 82.4 bits (202), Expect = 9e-14
Identities = 44/90 (48%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = +1
Query: 481 KRPGAAGLTKRSNTRVFTTNDRSINRSNEIYETLKMIEKLGKKK*YVAQTENAVS-VVKV 657
K PG + + ++ T VFT +DRS + S+EIY+ L+ +EKL KKK YVA+TE + + +
Sbjct: 684 KEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEEN 743
Query: 658 DKEQRLWHHSKRLALAFGLLTFP*VTPSRM 747
++EQ LW+HS++LALAFGLLT P +P R+
Sbjct: 744 EEEQGLWYHSEKLALAFGLLTLPIDSPIRI 773
>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 556
Score = 232 bits (591), Expect = 7e-59
Identities = 114/176 (64%), Positives = 133/176 (75%)
Frame = +3
Query: 3 QQHGCAYQAIELFKDMLQEGIAPSNITFVSVLSACSHTGRVDEGFYYFNSMSEQHNLNPD 182
QQHG A +ELF+ ML+EGI P ITFVSVLSACSHTGRV+EGF+YFNSM + H + P
Sbjct: 262 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG 321
Query: 183 HEHYACMVDLLSRAGRLSEAKKFVKSMPIEPGVSVWGALLGACDRFSNLELGVEVAERLF 362
HEHYAC+VDLLSRAG L AK+F++ MPI+P SVWGALL AC SNL +G EVA +LF
Sbjct: 322 HEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 381
Query: 363 EIEPNNPGNYILLSNIYTRSGRLKEASEVRRLMGSKRVSKETGCSWID*KEQHTCF 530
++EP+NPGNY+LL NI TR+G L EA EVRR M S V KE GCSWID K F
Sbjct: 382 DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVF 437
Score = 85.5 bits (210), Expect = 1e-14
Identities = 41/89 (46%), Positives = 64/89 (71%)
Frame = +1
Query: 481 KRPGAAGLTKRSNTRVFTTNDRSINRSNEIYETLKMIEKLGKKK*YVAQTENAVSVVKVD 660
K PG + + +++T VFT +D+S ++ EIYE L+ +++L KKK YVA+TE A++ +
Sbjct: 421 KEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAEEY 480
Query: 661 KEQRLWHHSKRLALAFGLLTFP*VTPSRM 747
KEQ LW+HS+++ALAFGLL+ P P R+
Sbjct: 481 KEQSLWYHSEKIALAFGLLSLPAGAPIRI 509
>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 232 bits (591), Expect = 7e-59
Identities = 114/176 (64%), Positives = 133/176 (75%)
Frame = +3
Query: 3 QQHGCAYQAIELFKDMLQEGIAPSNITFVSVLSACSHTGRVDEGFYYFNSMSEQHNLNPD 182
QQHG A +ELF+ ML+EGI P ITFVSVLSACSHTGRV+EGF+YFNSM + H + P
Sbjct: 410 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPG 469
Query: 183 HEHYACMVDLLSRAGRLSEAKKFVKSMPIEPGVSVWGALLGACDRFSNLELGVEVAERLF 362
HEHYAC+VDLLSRAG L AK+F++ MPI+P SVWGALL AC SNL +G EVA +LF
Sbjct: 470 HEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLF 529
Query: 363 EIEPNNPGNYILLSNIYTRSGRLKEASEVRRLMGSKRVSKETGCSWID*KEQHTCF 530
++EP+NPGNY+LL NI TR+G L EA EVRR M S V KE GCSWID K F
Sbjct: 530 DLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVF 585
Score = 85.5 bits (210), Expect = 1e-14
Identities = 41/89 (46%), Positives = 64/89 (71%)
Frame = +1
Query: 481 KRPGAAGLTKRSNTRVFTTNDRSINRSNEIYETLKMIEKLGKKK*YVAQTENAVSVVKVD 660
K PG + + +++T VFT +D+S ++ EIYE L+ +++L KKK YVA+TE A++ +
Sbjct: 569 KEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAEEY 628
Query: 661 KEQRLWHHSKRLALAFGLLTFP*VTPSRM 747
KEQ LW+HS+++ALAFGLL+ P P R+
Sbjct: 629 KEQSLWYHSEKIALAFGLLSLPAGAPIRI 657