BLASTX nr result

ID: Bupleurum21_contig00032755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032755
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852...   119   3e-25
ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852...   119   3e-25
emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]   118   4e-25
ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222...   114   8e-24

>ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
           vinifera] gi|359495533|ref|XP_003635013.1| PREDICTED:
           uncharacterized protein LOC100852917 isoform 3 [Vitis
           vinifera]
          Length = 335

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -2

Query: 299 GEEAPVRLSLMALLEETEAEVGLEPVDDVVAEDGRGVECDEGGAGAG-EMNGCCCCVCMV 123
           G EA  R+SLMALLEET+ + G+     V+ E+    E +E G+G G E N   CCVCMV
Sbjct: 236 GPEAAPRMSLMALLEETDRQAGIVGPAYVLEEEEDEDEEEEAGSGGGIEYN---CCVCMV 292

Query: 122 RGKGSAFIPCGHTFCRLCSREIWIRRGKCPLCNTQIMEIL 3
           R KG+AFIPCGHTFCRLCSRE+W+ RG CPLCN  I+EIL
Sbjct: 293 RHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEIL 332


>ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
           vinifera]
          Length = 329

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -2

Query: 299 GEEAPVRLSLMALLEETEAEVGLEPVDDVVAEDGRGVECDEGGAGAG-EMNGCCCCVCMV 123
           G EA  R+SLMALLEET+ + G+     V+ E+    E +E G+G G E N   CCVCMV
Sbjct: 230 GPEAAPRMSLMALLEETDRQAGIVGPAYVLEEEEDEDEEEEAGSGGGIEYN---CCVCMV 286

Query: 122 RGKGSAFIPCGHTFCRLCSREIWIRRGKCPLCNTQIMEIL 3
           R KG+AFIPCGHTFCRLCSRE+W+ RG CPLCN  I+EIL
Sbjct: 287 RHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEIL 326


>emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
          Length = 326

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -2

Query: 299 GEEAPVRLSLMALLEETEAEVGLEPVDDVVAEDGRGVECDEGGAGAG-EMNGCCCCVCMV 123
           G EA  R+SLMALLEET+ + G+     V+ E+    E +EG +G G E N   CCVCMV
Sbjct: 227 GPEAAPRMSLMALLEETDRQAGIVGPAYVLEEEEDEDEEEEGDSGGGIEYN---CCVCMV 283

Query: 122 RGKGSAFIPCGHTFCRLCSREIWIRRGKCPLCNTQIMEIL 3
           R KG+AFIPCGHTFCRLCSRE+W+ RG CPLCN  I+EIL
Sbjct: 284 RHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEIL 323


>ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|222843517|gb|EEE81064.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 9/106 (8%)
 Frame = -2

Query: 293 EAPVRLSLMALLEETEAEVGLE----PVDDVVAEDGRGVECDEGGAGAGEMNGCC----- 141
           + PVR+SLM LLEET+ ++G E     V D+ A D    E +E   G  E +G       
Sbjct: 288 QEPVRMSLMDLLEETDRQMGFEGSRYTVGDLEACDDDDDEDEEEEDGGEEGDGVAGIEYT 347

Query: 140 CCVCMVRGKGSAFIPCGHTFCRLCSREIWIRRGKCPLCNTQIMEIL 3
           CCVCMVR KG+AFIPCGHTFCRLCSRE+W++RG CPLCN  I+EIL
Sbjct: 348 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 393


>ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222466 [Cucumis sativus]
           gi|449475393|ref|XP_004154438.1| PREDICTED:
           uncharacterized LOC101222466 [Cucumis sativus]
          Length = 342

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/105 (54%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
 Frame = -2

Query: 290 APVRLSLMALLEETEAEVGLEPVDDVVAEDGRGVE---------CDEGGAGAGEMNGCCC 138
           APVR+SLM LLEET+ ++G E     + ++    E         C  GG+G  E +   C
Sbjct: 238 APVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVSTTVCGGGGSGGTEPH---C 294

Query: 137 CVCMVRGKGSAFIPCGHTFCRLCSREIWIRRGKCPLCNTQIMEIL 3
           CVCMVR KG+AFIPCGHTFCRLCSRE+W+ RG CPLCN  I+EIL
Sbjct: 295 CVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEIL 339


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