BLASTX nr result

ID: Bupleurum21_contig00032751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032751
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
emb|CBI29860.3| unnamed protein product [Vitis vinifera]              216   1e-54
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          214   7e-54
ref|XP_004167551.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51

>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  228 bits (581), Expect = 4e-58
 Identities = 107/139 (76%), Positives = 118/139 (84%)
 Frame = +1

Query: 1   IKVIPGCTSIEVDGLVYEFVMGDWSHPEHKEIREVLQDVRRRVCESGHAPWISAVLHNVG 180
           IK +PGC+SIEVDGLV+EFVMGDWSHPE  E+RE+L+D+ +RV   GH P IS VLHNV 
Sbjct: 426 IKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVV 485

Query: 181 DEEKENDLCEHSERLAIAYGLLKTKAPVVIRVVKNLRACEDCHEVTKIISKLYMREIIVR 360
           DEEKEN LCEHSERLAIAYGLLKTK P+ IR+VKNLR C DCHEVTKIIS  Y REIIVR
Sbjct: 486 DEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVR 545

Query: 361 DRLRFHKFANGSCSCGDFW 417
           DR+RFHKF NGSCSC DFW
Sbjct: 546 DRVRFHKFVNGSCSCRDFW 564


>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  216 bits (551), Expect = 1e-54
 Identities = 103/134 (76%), Positives = 114/134 (85%)
 Frame = +1

Query: 1   IKVIPGCTSIEVDGLVYEFVMGDWSHPEHKEIREVLQDVRRRVCESGHAPWISAVLHNVG 180
           IK +PGC+SIEVDGLV+EFVMGDWSHPE  E+RE+L+D+ +RV   GH P IS VLHNV 
Sbjct: 495 IKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVLHNVV 554

Query: 181 DEEKENDLCEHSERLAIAYGLLKTKAPVVIRVVKNLRACEDCHEVTKIISKLYMREIIVR 360
           DEEKEN LCEHSERLAIAYGLLKTK P+ IR+VKNLR C DCHEVTKIIS  Y REIIVR
Sbjct: 555 DEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRREIIVR 614

Query: 361 DRLRFHKFANGSCS 402
           DR+RFHKF NGSCS
Sbjct: 615 DRVRFHKFVNGSCS 628


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  214 bits (545), Expect = 7e-54
 Identities = 99/139 (71%), Positives = 116/139 (83%)
 Frame = +1

Query: 1   IKVIPGCTSIEVDGLVYEFVMGDWSHPEHKEIREVLQDVRRRVCESGHAPWISAVLHNVG 180
           IK +PGCTSIEVDG V+ FV GDWSHPE +EI++ L+DV  ++  SG+ P++S VLH V 
Sbjct: 425 IKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVSVVLHLVN 484

Query: 181 DEEKENDLCEHSERLAIAYGLLKTKAPVVIRVVKNLRACEDCHEVTKIISKLYMREIIVR 360
           DEEKEN L EHSERLAIAYGL+KTKAP  IR+VKNLR C DCHEVTKIISK+Y REIIVR
Sbjct: 485 DEEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVR 544

Query: 361 DRLRFHKFANGSCSCGDFW 417
           DR+RFHKF NG+CSC D+W
Sbjct: 545 DRVRFHKFVNGTCSCKDYW 563


>ref|XP_004167551.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 151

 Score =  206 bits (523), Expect = 2e-51
 Identities = 100/139 (71%), Positives = 115/139 (82%)
 Frame = +1

Query: 1   IKVIPGCTSIEVDGLVYEFVMGDWSHPEHKEIREVLQDVRRRVCESGHAPWISAVLHNVG 180
           IK +PGC+SIEVDG+V+EFVMGD SHPE K +RE ++++  RV +SG+ P IS VLH V 
Sbjct: 13  IKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKVV 72

Query: 181 DEEKENDLCEHSERLAIAYGLLKTKAPVVIRVVKNLRACEDCHEVTKIISKLYMREIIVR 360
           DEEKE  L EHSER AIAYGLLKT+AP+VIRVVKNLR C DCHEV KIISKLY REIIVR
Sbjct: 73  DEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVR 132

Query: 361 DRLRFHKFANGSCSCGDFW 417
           DR+RFHKF  G+CSC DFW
Sbjct: 133 DRVRFHKFIKGTCSCKDFW 151


>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  206 bits (523), Expect = 2e-51
 Identities = 100/139 (71%), Positives = 115/139 (82%)
 Frame = +1

Query: 1   IKVIPGCTSIEVDGLVYEFVMGDWSHPEHKEIREVLQDVRRRVCESGHAPWISAVLHNVG 180
           IK +PGC+SIEVDG+V+EFVMGD SHPE K +RE ++++  RV +SG+ P IS VLH V 
Sbjct: 426 IKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVLHKVV 485

Query: 181 DEEKENDLCEHSERLAIAYGLLKTKAPVVIRVVKNLRACEDCHEVTKIISKLYMREIIVR 360
           DEEKE  L EHSER AIAYGLLKT+AP+VIRVVKNLR C DCHEV KIISKLY REIIVR
Sbjct: 486 DEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYEREIIVR 545

Query: 361 DRLRFHKFANGSCSCGDFW 417
           DR+RFHKF  G+CSC DFW
Sbjct: 546 DRVRFHKFIKGTCSCKDFW 564


Top