BLASTX nr result

ID: Bupleurum21_contig00032733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032733
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]   161   6e-38
ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...   156   1e-36
ref|XP_002526659.1| transcription factor, putative [Ricinus comm...   147   7e-34
ref|XP_002323604.1| GRAS family transcription factor [Populus tr...   145   3e-33
ref|XP_002526658.1| transcription factor, putative [Ricinus comm...   139   2e-31

>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 5/173 (2%)
 Frame = +1

Query: 1   DNYASNPSIWKFEDTKQRLHEYGRSYNITLMVDEMTLQELIDDIKN----GNGREWLAFN 168
           + Y    S W+FE+TK+ L+ + RS  + L V+EM LQ L+++IK     G   EWLAFN
Sbjct: 301 EGYVCAASQWRFEETKRHLYNHARSVGLKLKVEEMELQGLMNEIKRTKKKGGRNEWLAFN 360

Query: 169 CMANLPHTGSRRNRSDVIKFLRLAQTTLVNS-TTYKGILAFGHGEDGEIMNHTSTFSAFF 345
           CM  LPH GS   R   ++F+R+A+   V+S    +GI+ FG G+  E   +TS+F  FF
Sbjct: 361 CMMGLPHMGSTGRRRQAMEFMRVAKELTVHSKNNNRGIITFGDGDGWEKQKNTSSFRLFF 420

Query: 346 AENLRHYHALFESMECNFPAYYAEARLAMESLFLAPYVSSPSYFHRWEEIKNG 504
            E L HY AL ESME  FP ++AEAR+AME LF+AP+VSS   F +WEE+K G
Sbjct: 421 NEYLLHYQALLESMEWTFPTHFAEARIAMECLFVAPHVSSLGRFQKWEEMKGG 473


>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score =  156 bits (395), Expect = 1e-36
 Identities = 80/173 (46%), Positives = 110/173 (63%), Gaps = 5/173 (2%)
 Frame = +1

Query: 1   DNYASNPSIWKFEDTKQRLHEYGRSYNITLMVDEMTLQELIDDIKN----GNGREWLAFN 168
           + Y    S W+FE+TK+ L+ + RS  + L V+EM LQ L+++IK     G   EWLAFN
Sbjct: 436 EGYVCAASQWRFEETKRHLYNHARSVGLKLKVEEMELQGLMNEIKRTKKKGGRSEWLAFN 495

Query: 169 CMANLPHTGSRRNRSDVIKFLRLAQTTLVNS-TTYKGILAFGHGEDGEIMNHTSTFSAFF 345
           CM  L H GS   R   ++F+ +A+   V+S    +GI+ FG G+  E   +TS+F  FF
Sbjct: 496 CMMGLSHMGSTGRRRQAMEFMTVAKELTVHSKNNNRGIITFGDGDGWEKQKNTSSFRLFF 555

Query: 346 AENLRHYHALFESMECNFPAYYAEARLAMESLFLAPYVSSPSYFHRWEEIKNG 504
            E L HY AL ESME  FP ++AEAR+AME LF+AP+VSS  +F +WEE+K G
Sbjct: 556 NEYLIHYQALLESMEWTFPTHFAEARIAMECLFVAPHVSSLGWFQKWEEMKGG 608


>ref|XP_002526659.1| transcription factor, putative [Ricinus communis]
           gi|223533959|gb|EEF35681.1| transcription factor,
           putative [Ricinus communis]
          Length = 509

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/174 (41%), Positives = 111/174 (63%), Gaps = 8/174 (4%)
 Frame = +1

Query: 1   DNYASNPSIWKFEDTKQRLHEYGRSYNITLMVDEMTLQELIDDIKN----GNGREWLAFN 168
           +N    P +W F + K+RL ++ R + + L V+EM +++L+ +IK     G  +EWLAFN
Sbjct: 272 ENCDEAPLMWSFSEAKRRLVDHARPFGLKLKVEEMGIEDLVSEIKRTKKRGGRKEWLAFN 331

Query: 169 CMANLPHTGSRRNRSDVIKFLRLAQTTLVNS----TTYKGILAFGHGEDGEIMNHTSTFS 336
           CM  LPH G  R+R  V  F+R+A+  + +S    ++ +GIL FG G+  E +   S F+
Sbjct: 332 CMVGLPHMGRVRSRKLVEDFVRVAKDLMADSVCCNSSNRGILTFGDGDAWETVRDCSGFA 391

Query: 337 AFFAENLRHYHALFESMECNFPAYYAEARLAMESLFLAPYVSSPSYFHRWEEIK 498
           ++F  NL HY AL ES+E NFP + AEAR+A+E LF+ P++SS ++  RW E+K
Sbjct: 392 SYFEGNLMHYQALLESIEMNFPIHLAEARMALECLFVTPFISSQAWIQRWMEMK 445


>ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222868234|gb|EEF05365.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 535

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/170 (40%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
 Frame = +1

Query: 19  PSIWKFEDTKQRLHEYGRSYNITLMVDEMTLQELIDDIKNGN----GREWLAFNCMANLP 186
           P +W F+  K+RL ++ R + + L V+EM +++L  + K  N    G+EWL FN M  LP
Sbjct: 304 PMVWSFDAAKRRLLDHARYFGLNLKVEEMGIEDLASEEKKANKRGVGKEWLVFNSMLRLP 363

Query: 187 HTGSRRNRSDVIKFLRLAQTTLVNS----TTYKGILAFGHGEDGEIMNHTSTFSAFFAEN 354
           H G  R+R  V +FLR+A+  L NS    ++ +GI+ FG G+  E + ++S F +FF  +
Sbjct: 364 HMGRARSRQLVEQFLRVAKALLANSAFCNSSSRGIITFGDGDSCENLKNSSDFGSFFEGH 423

Query: 355 LRHYHALFESMECNFPAYYAEARLAMESLFLAPYVSSPSYFHRWEEIKNG 504
           + HY AL +S+E  FP +  EAR+A+E LF+APY+SS  ++ +W E+K G
Sbjct: 424 MAHYKALLDSIESKFPVHLTEARMALECLFVAPYISSQDWYQKWVEMKQG 473


>ref|XP_002526658.1| transcription factor, putative [Ricinus communis]
           gi|223533958|gb|EEF35680.1| transcription factor,
           putative [Ricinus communis]
          Length = 517

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/160 (44%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
 Frame = +1

Query: 31  KFEDTKQRLHEYGRSYNITLMVDEMTLQELIDDIKNGNGREWLAFNCMANLPHTGSRRNR 210
           K E+TK+RL  Y  S  + L V+E+ +Q L  +IK G  +EWLAFNCM  +PH G  R+R
Sbjct: 296 KLEETKRRLQNYADSLGLMLHVEEIEVQNLAREIKRGGRKEWLAFNCMWAIPHMGRIRSR 355

Query: 211 SDVIKFLRLAQTTLVN--STTYKGILAFGHGEDGEIMNHTSTFSAFFAENLRHYHALFES 384
             VI+FL +A+ ++ +      +GI+ FG G   E +++   F +FF   + HY  L ES
Sbjct: 356 RHVIEFLTMAKDSVADWSDDRSRGIVTFGEGIGHETLSNCDGFGSFFERYMEHYEGLLES 415

Query: 385 MECNFPAYYAEARLAMESLFLAPYVSSPSYFHRWEEIKNG 504
           +E  FP + AEARL+ME LFLAPYVS  S    W+EI  G
Sbjct: 416 IEWGFPIHLAEARLSMECLFLAPYVSRVSMMQTWKEINEG 455


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