BLASTX nr result

ID: Bupleurum21_contig00032716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032716
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90328.2| Pentatricopeptide repeat domain containing protei...   206   1e-51
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   202   2e-50
ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   201   5e-50
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat...   201   5e-50
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   197   6e-49

>gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/123 (76%), Positives = 112/123 (91%)
 Frame = +1

Query: 1   RGLVEEALWFFNSMTETYKLVPKKEHYASVVDVLCRKGKFDEAEKLITKMPFEPDEIMWS 180
           RGLVE+ALW+FNSMT+ YKL P+++HYA+++DVLCR G+F+EAE LI++MPFEPDE+MWS
Sbjct: 560 RGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWS 619

Query: 181 SVLNSCRIHKNQDLAKKAAEKLFNMDVLKDAAAYVNMSNIYAAAGQWHEVGKVKKAMRER 360
           SVLNSCRIHKNQDLAKKAA++LF MD L+DAAAYVNMSNIYA AG+W    KVKKAMRER
Sbjct: 620 SVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRER 679

Query: 361 GVK 369
           GVK
Sbjct: 680 GVK 682


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  202 bits (514), Expect = 2e-50
 Identities = 97/122 (79%), Positives = 108/122 (88%)
 Frame = +1

Query: 4   GLVEEALWFFNSMTETYKLVPKKEHYASVVDVLCRKGKFDEAEKLITKMPFEPDEIMWSS 183
           GLVEE L +F+SMT  YKLVPKKEHYAS +D+LCR G+FDEAEKL+ +MPFEPDEIMWSS
Sbjct: 616 GLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSS 675

Query: 184 VLNSCRIHKNQDLAKKAAEKLFNMDVLKDAAAYVNMSNIYAAAGQWHEVGKVKKAMRERG 363
           VLNSC IHKNQ+LAKKAA +LFNM VL+DAA YV MSNIYAAAG+W  VGKVKKAMRERG
Sbjct: 676 VLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERG 735

Query: 364 VK 369
           VK
Sbjct: 736 VK 737


>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/122 (75%), Positives = 108/122 (88%)
 Frame = +1

Query: 4   GLVEEALWFFNSMTETYKLVPKKEHYASVVDVLCRKGKFDEAEKLITKMPFEPDEIMWSS 183
           G VEEALW FNSMT+ Y++ PK+EHY S+VDVLCR G+FDEAEKL+T+MPFEP EIMWSS
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 184 VLNSCRIHKNQDLAKKAAEKLFNMDVLKDAAAYVNMSNIYAAAGQWHEVGKVKKAMRERG 363
           VLNSCRIHKN +LAKKAA++LFNM+ L+DAA Y+NMSNIYA AGQW  V KVKKAMR+RG
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677

Query: 364 VK 369
           V+
Sbjct: 678 VR 679


>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/122 (75%), Positives = 108/122 (88%)
 Frame = +1

Query: 4   GLVEEALWFFNSMTETYKLVPKKEHYASVVDVLCRKGKFDEAEKLITKMPFEPDEIMWSS 183
           G VEEALW FNSMT+ Y++ PK+EHY S+VDVLCR G+FDEAEKL+T+MPFEP EIMWSS
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 184 VLNSCRIHKNQDLAKKAAEKLFNMDVLKDAAAYVNMSNIYAAAGQWHEVGKVKKAMRERG 363
           VLNSCRIHKN +LAKKAA++LFNM+ L+DAA Y+NMSNIYA AGQW  V KVKKAMR+RG
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677

Query: 364 VK 369
           V+
Sbjct: 678 VR 679


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/122 (74%), Positives = 109/122 (89%)
 Frame = +1

Query: 4   GLVEEALWFFNSMTETYKLVPKKEHYASVVDVLCRKGKFDEAEKLITKMPFEPDEIMWSS 183
           GLVEE LW FNSMT+ YKL P++EHYASVVD+LCR G+F+EAEKL+ +MP +PDEIMWSS
Sbjct: 567 GLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSS 626

Query: 184 VLNSCRIHKNQDLAKKAAEKLFNMDVLKDAAAYVNMSNIYAAAGQWHEVGKVKKAMRERG 363
           VLN+CRIHKNQ+LA++AA++LFNM+ L+DAA YVNMSNIYAAAGQW  V KV KAMR+RG
Sbjct: 627 VLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRG 686

Query: 364 VK 369
           VK
Sbjct: 687 VK 688


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