BLASTX nr result

ID: Bupleurum21_contig00032711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032711
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319841.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002533083.1| conserved hypothetical protein [Ricinus comm...    89   5e-16
emb|CAN83957.1| hypothetical protein VITISV_039906 [Vitis vinifera]    85   5e-15
ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264...    84   2e-14
ref|XP_004149328.1| PREDICTED: uncharacterized protein LOC101215...    72   5e-11

>ref|XP_002319841.1| predicted protein [Populus trichocarpa] gi|222858217|gb|EEE95764.1|
           predicted protein [Populus trichocarpa]
          Length = 1075

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = -2

Query: 375 KLSEGMADMCISHVRLVLFWSHQIQSSYRREPPHDFTRISELCFTVLRTLVTHFFSVKTG 196
           +LSE   D  ISH+RL+LFW HQI SSYR +P  +  R++E+C+ +++ ++    + K  
Sbjct: 167 RLSESSTDSVISHLRLILFWFHQIWSSYRIKPLTELERLAEICYVLVKHILAQPLASKLN 226

Query: 195 S----GSKISGTTLQEVAECFFSHPAVLTSLEHPFSINQELAENISEVSLEDLFGLAKKG 28
           S    G  +S   + EVAE  F HPAV+ SL HP   + +  E     SLE++   + + 
Sbjct: 227 SPMNAGVPLSADNIGEVAETIFCHPAVVASLVHPLHCHGDFTEGKLGESLEEILCFSGQT 286

Query: 27  THTMDCHV 4
            H +D HV
Sbjct: 287 VHKIDHHV 294


>ref|XP_002533083.1| conserved hypothetical protein [Ricinus communis]
            gi|223527122|gb|EEF29298.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2587

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
 Frame = -2

Query: 375  KLSEGMADMCISHVRLVLFWSHQIQSSYRREPPHDFTRISELCFTVLRTLVTHFFSVKTG 196
            KLSE  +D  +S++RL+LFW +QIQ SYR +P       +E+C+ +++ ++     +K  
Sbjct: 1082 KLSECKSDFVVSYLRLLLFWFYQIQVSYRIKPLVKLEEFAEICYILVKHMLDQLLVLKAD 1141

Query: 195  SGSKISGTTLQEVAECFFSHPAVLTSLEHPF-----SINQELAENISEVSLEDLFGLAKK 31
            SG+ +S   ++E AE  F HPAV  +L HP      +IN + AE     +LE  +  +++
Sbjct: 1142 SGNPLSAELIREAAESIFYHPAVKAALTHPLGCDDNAINDDFAEGNFRGNLEAFYNSSQQ 1201

Query: 30   GTHTMDCHVW 1
              H +D HV+
Sbjct: 1202 KVHPIDHHVF 1211


>emb|CAN83957.1| hypothetical protein VITISV_039906 [Vitis vinifera]
          Length = 2715

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
 Frame = -2

Query: 375  KLSEGMADMCISHVRLVLFWSHQIQSSYRREPPHDFTRISELCFTVLRTLVTHFFSVKTG 196
            KLSE   D  I  +R VLFW HQIQS YR  P  +   + E+CF ++  ++     ++  
Sbjct: 1091 KLSEQTTDYLILSLRHVLFWIHQIQSYYRIRPLGELEHLFEVCFILVERMLDELLVLRPD 1150

Query: 195  SGSK----ISGTTLQEVAECFFSHPAVLTSLEHPFSINQELAENISEVSLEDLFGLAKKG 28
            S       +  +T+QEVAE  F HPAV+ SL  P S ++EL +     SLE     +K  
Sbjct: 1151 SDCSTTIGVPFSTVQEVAEIIFCHPAVMVSLSCPLSCHEELTKGTIGDSLETFLRSSKHS 1210

Query: 27   THTMDCHV 4
             H MD HV
Sbjct: 1211 VHKMDHHV 1218


>ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264016 [Vitis vinifera]
          Length = 2563

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
 Frame = -2

Query: 375  KLSEGMADMCISHVRLVLFWSHQIQSSYRREPPHDFTRISELCFTVLRTLVTHFFSVKTG 196
            KLSE   D  I  +R VLFW HQI+S YR  P  +   + E+CF ++  ++     ++  
Sbjct: 1046 KLSEQTTDYLILSLRHVLFWIHQIRSYYRIRPLGELEHLFEVCFILVERMLDELLVLRPD 1105

Query: 195  SGSK----ISGTTLQEVAECFFSHPAVLTSLEHPFSINQELAENISEVSLEDLFGLAKKG 28
            S       +  +T+QEVAE  F HPAV+ SL  P S ++EL +     SLE     +K  
Sbjct: 1106 SDCSTTIGVPFSTVQEVAEIIFCHPAVMVSLSCPLSCHEELTKGTIGDSLETFLRSSKHS 1165

Query: 27   THTMDCHV 4
             H MD HV
Sbjct: 1166 VHKMDHHV 1173


>ref|XP_004149328.1| PREDICTED: uncharacterized protein LOC101215477 [Cucumis sativus]
          Length = 2446

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/131 (30%), Positives = 76/131 (58%), Gaps = 7/131 (5%)
 Frame = -2

Query: 375  KLSEGMAD-MCISHVRLVLFWSHQIQSSYRREPPHDFTRISELCFTVLRTLVTHFFSVKT 199
            KLSE   D + + +++LVLFW +QI+ SYR +P  +  ++S++C  +++ ++    + +T
Sbjct: 931  KLSELTFDHLLLPYLQLVLFWMYQIRISYRFKPLVELEKLSQICIVLVQNILAKLLATRT 990

Query: 198  GSGS------KISGTTLQEVAECFFSHPAVLTSLEHPFSINQELAENISEVSLEDLFGLA 37
             S +       +    +Q+VAE  FSHPAV++SL    +    L  +  +++LE L  L+
Sbjct: 991  QSVAVGDYKGSLLRLEVQDVAETIFSHPAVISSLSCSLNCPGNLVFDAIDLNLESLVQLS 1050

Query: 36   KKGTHTMDCHV 4
            +K  + +D H+
Sbjct: 1051 RKSVNILDHHI 1061


Top