BLASTX nr result

ID: Bupleurum21_contig00032710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032710
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264...   114   6e-24
emb|CBI26624.3| unnamed protein product [Vitis vinifera]              114   6e-24
emb|CAN83957.1| hypothetical protein VITISV_039906 [Vitis vinifera]   114   6e-24
ref|XP_002319841.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002533083.1| conserved hypothetical protein [Ricinus comm...   107   1e-21

>ref|XP_003634725.1| PREDICTED: uncharacterized protein LOC100264016 [Vitis vinifera]
          Length = 2563

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = -1

Query: 467  KKGTHTMDCHVWNMVASACDHLVSFLNHQNSLSEVDCGYGKT-IKAFNSLVRKLLLILKG 291
            K   H MD HV N++ S  D+LV+  + QN +S+VD    K  +K F +L+++LLL L+ 
Sbjct: 1163 KHSVHKMDHHVLNLLISTSDYLVALCDGQNPISKVDDSAKKQLVKVFKALLQRLLLELRS 1222

Query: 290  KFDLWLRTKDVTPLIPSLYALHTLLRFISPFTLLELVHYVFSIVDLKDSAVWGCCTKPAL 111
            +FD+ +RTK+  P + + YA H L  FISPF L EL +++FS VDL D          AL
Sbjct: 1223 RFDVCIRTKNFVPFLQAFYASHILSHFISPFKLFELAYWMFSRVDLNDLTTGEFDNMSAL 1282

Query: 110  CIGLHIAGHAFDLLSAYLQDPYITQKQIGL-WEEE 9
             +   IA  AFD+LS+Y Q P   + Q  L WE E
Sbjct: 1283 SVVFCIASGAFDMLSSYFQHPITKKVQFDLFWEME 1317


>emb|CBI26624.3| unnamed protein product [Vitis vinifera]
          Length = 2565

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = -1

Query: 467  KKGTHTMDCHVWNMVASACDHLVSFLNHQNSLSEVDCGYGKT-IKAFNSLVRKLLLILKG 291
            K   H MD HV N++ S  D+LV+  + QN +S+VD    K  +K F +L+++LLL L+ 
Sbjct: 1062 KHSVHKMDHHVLNLLISTSDYLVALCDGQNPISKVDDSAKKQLVKVFKALLQRLLLELRS 1121

Query: 290  KFDLWLRTKDVTPLIPSLYALHTLLRFISPFTLLELVHYVFSIVDLKDSAVWGCCTKPAL 111
            +FD+ +RTK+  P + + YA H L  FISPF L EL +++FS VDL D          AL
Sbjct: 1122 RFDVCIRTKNFVPFLQAFYASHILSHFISPFKLFELAYWMFSRVDLNDLTTGEFDNMSAL 1181

Query: 110  CIGLHIAGHAFDLLSAYLQDPYITQKQIGL-WEEE 9
             +   IA  AFD+LS+Y Q P   + Q  L WE E
Sbjct: 1182 SVVFCIASGAFDMLSSYFQHPITKKVQFDLFWEME 1216


>emb|CAN83957.1| hypothetical protein VITISV_039906 [Vitis vinifera]
          Length = 2715

 Score =  114 bits (286), Expect = 6e-24
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
 Frame = -1

Query: 467  KKGTHTMDCHVWNMVASACDHLVSFLNHQNSLSEVDCGYGKT-IKAFNSLVRKLLLILKG 291
            K   H MD HV N++ S  D+LV+  + QN +S+VD    K  +K F +L+++LLL L+ 
Sbjct: 1208 KHSVHKMDHHVLNLLISTSDYLVALCDGQNPISKVDDSAKKQLVKVFKALLQRLLLELRS 1267

Query: 290  KFDLWLRTKDVTPLIPSLYALHTLLRFISPFTLLELVHYVFSIVDLKDSAVWGCCTKPAL 111
            +FD+ +RTK+  P + + YA H L  FISPF L EL +++FS VDL D          AL
Sbjct: 1268 RFDVCIRTKNFVPFLQAFYASHILSHFISPFKLFELAYWMFSRVDLNDLTTGEFDNMSAL 1327

Query: 110  CIGLHIAGHAFDLLSAYLQDPYITQKQIGL-WEEE 9
             +   IA  AFD+LS+Y Q P   + Q  L WE E
Sbjct: 1328 SVVFCIASGAFDMLSSYFQHPITKKVQFDLFWEME 1362


>ref|XP_002319841.1| predicted protein [Populus trichocarpa] gi|222858217|gb|EEE95764.1|
           predicted protein [Populus trichocarpa]
          Length = 1075

 Score =  109 bits (272), Expect = 3e-22
 Identities = 63/138 (45%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
 Frame = -1

Query: 455 HTMDCHVWNMVASACDHL--VSFLNHQNSLSEVDCGYGKTIKAFNSLVRKLLLILKGKFD 282
           H +D HV +M+ +  D L  +S   H+++L   DC     +KAFN+L+++L L ++ KFD
Sbjct: 288 HKIDHHVLDMLTATFDDLFLLSGGQHRSTLEFDDCASKLIVKAFNTLLQRLYLEVRDKFD 347

Query: 281 LWLRTKDVTPLIPSLYALHTLLRFISPFTLLELVHYVFSIVDLKDSAVWGCCTKPALCIG 102
               T+D  PL+P  YALH L RFISPF LL+LVH++F  VD     V       AL +G
Sbjct: 348 QCTSTEDPLPLLPLFYALHALNRFISPFELLKLVHWMFGRVDASGLNVQKHFGLSALSVG 407

Query: 101 LHIAGHAFDLLSAYLQDP 48
           L IA  AFD+LSAYLQ P
Sbjct: 408 LCIAADAFDILSAYLQQP 425


>ref|XP_002533083.1| conserved hypothetical protein [Ricinus communis]
            gi|223527122|gb|EEF29298.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2587

 Score =  107 bits (266), Expect = 1e-21
 Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = -1

Query: 455  HTMDCHVWNMVASACDHLVSFLNHQNSLSEVDCGYGKT-IKAFNSLVRKLLLILKGKFDL 279
            H +D HV+NM+ +  ++ +S    Q+ + +VD G  K  +KAF +L++ L L LK KFDL
Sbjct: 1204 HPIDHHVFNMLITTFEYFLSPSGGQHHVLKVDDGESKLLVKAFKTLMQSLYLELKDKFDL 1263

Query: 278  WLRTKDVTPLIPSLYALHTLLRFISPFTLLELVHYVFSIVDLKDSAVWGCCTKPALCIGL 99
             +RT+D+ PL+   YALH L++F SPF L  L  ++   V++ D AV    T  AL IG 
Sbjct: 1264 CIRTEDLLPLLQPFYALHALMQFASPFELFGLARWILDRVEVNDLAVLNSFTTFALSIGF 1323

Query: 98   HIAGHAFDLLSAYLQDPYITQ 36
             IA  AF +LS YLQ P  T+
Sbjct: 1324 CIAADAFKILSIYLQQPVRTK 1344


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