BLASTX nr result

ID: Bupleurum21_contig00032709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032709
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17132.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267...   110   2e-22
emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]   109   4e-22
ref|XP_002523727.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp....    96   4e-18

>emb|CBI17132.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/100 (56%), Positives = 70/100 (70%)
 Frame = +2

Query: 311 VVVVGFIGRRNCDVGQLINRVLDANVFGSGNLDQKFMFENVESVGEELKDWLKRKKISFY 490
           VVVVGFIGRR  DV  L+NR+LD N FGSGNL++    E      EE+K W + ++IS+Y
Sbjct: 60  VVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEK-----EEVKGWFESRRISYY 114

Query: 491 HEEEKGILYLQLSSKRCPVMEGLFSEIESGFDSVMEENEF 610
           H+EEKGIL+LQ  S  CP MEG F + + GFDS +EE EF
Sbjct: 115 HDEEKGILFLQYCSTGCPAMEG-FLQTDWGFDSALEEREF 153


>ref|XP_002272611.1| PREDICTED: uncharacterized protein LOC100267175 [Vitis vinifera]
          Length = 1226

 Score =  110 bits (275), Expect = 2e-22
 Identities = 56/100 (56%), Positives = 70/100 (70%)
 Frame = +2

Query: 311 VVVVGFIGRRNCDVGQLINRVLDANVFGSGNLDQKFMFENVESVGEELKDWLKRKKISFY 490
           VVVVGFIGRR  DV  L+NR+LD N FGSGNL++    E      EE+K W + ++IS+Y
Sbjct: 51  VVVVGFIGRRPDDVSHLMNRILDLNAFGSGNLEKGLCIEK-----EEVKGWFESRRISYY 105

Query: 491 HEEEKGILYLQLSSKRCPVMEGLFSEIESGFDSVMEENEF 610
           H+EEKGIL+LQ  S  CP MEG F + + GFDS +EE EF
Sbjct: 106 HDEEKGILFLQYCSTGCPAMEG-FLQTDWGFDSALEEREF 144


>emb|CAN59835.1| hypothetical protein VITISV_017621 [Vitis vinifera]
          Length = 177

 Score =  109 bits (272), Expect = 4e-22
 Identities = 56/100 (56%), Positives = 70/100 (70%)
 Frame = +2

Query: 311 VVVVGFIGRRNCDVGQLINRVLDANVFGSGNLDQKFMFENVESVGEELKDWLKRKKISFY 490
           VVVVGFIGRR  DV  L+NR+LD N FGSGNL++    E      EE+K W + ++IS+Y
Sbjct: 51  VVVVGFIGRRPDDVSHLMNRLLDLNAFGSGNLEKGLCIEK-----EEVKGWFEGRRISYY 105

Query: 491 HEEEKGILYLQLSSKRCPVMEGLFSEIESGFDSVMEENEF 610
           H+EEKGIL+LQ  S  CP MEG F + + GFDS +EE EF
Sbjct: 106 HDEEKGILFLQYCSTGCPAMEG-FLQTDWGFDSALEEREF 144


>ref|XP_002523727.1| conserved hypothetical protein [Ricinus communis]
           gi|223537031|gb|EEF38667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1233

 Score =  107 bits (266), Expect = 2e-21
 Identities = 66/145 (45%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
 Frame = +2

Query: 194 MDLPKSNPAPKRVLIRXXXXXXXXXXXXXXXXXIGQL-----NGVVVVGFIGRRNCDVGQ 358
           MD    NP   RVL R                   QL     +GV+VVGFI        Q
Sbjct: 1   MDSTNPNPPSVRVLTRPPTPAPSPDTQPLSSQSQTQLFPRSRDGVIVVGFISHNPDHSSQ 60

Query: 359 LINRVLDANVFGSGNLDQKFMFENVESVGEELKDWLKRKKISFYHEEEKGILYLQLSSKR 538
           LINRVLD+NVFGSG+LD+    +      EELKDW K ++IS+YH+EEKG L+LQ  S R
Sbjct: 61  LINRVLDSNVFGSGHLDKLLSIDK-----EELKDWFKWRRISYYHDEEKGFLFLQFCSIR 115

Query: 539 CPVMEGLF-SEIESGFDSVMEENEF 610
           CPV+ G   S +    DSV+EENEF
Sbjct: 116 CPVVHGSSRSGLLQDLDSVLEENEF 140


>ref|XP_002879111.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324950|gb|EFH55370.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1189

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 51/102 (50%), Positives = 67/102 (65%)
 Frame = +2

Query: 305 NGVVVVGFIGRRNCDVGQLINRVLDANVFGSGNLDQKFMFENVESVGEELKDWLKRKKIS 484
           NGVVVVGF+ RR  D   LIN+VLD NVFGSG L++    +       + +DW + +KI 
Sbjct: 44  NGVVVVGFLSRRPDDSSHLINQVLDNNVFGSGKLNKILTVDK-----PDFQDWFRFRKIC 98

Query: 485 FYHEEEKGILYLQLSSKRCPVMEGLFSEIESGFDSVMEENEF 610
           +YHEE+KGI+++Q S   CP    L S  +SGFDSV+EE EF
Sbjct: 99  YYHEEDKGIVFVQFSPIICP---ALSSSSDSGFDSVLEEREF 137


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