BLASTX nr result

ID: Bupleurum21_contig00032678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032678
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277657.1| PREDICTED: uncharacterized protein LOC100244...    59   5e-07
ref|NP_189988.1| thylakoid lumenal P17.1 protein [Arabidopsis th...    58   9e-07
ref|XP_003569922.1| PREDICTED: uncharacterized protein LOC100843...    58   9e-07
ref|XP_002313628.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|EAY77083.1| hypothetical protein OsI_05045 [Oryza sativa Indi...    57   1e-06

>ref|XP_002277657.1| PREDICTED: uncharacterized protein LOC100244480 [Vitis vinifera]
           gi|296084014|emb|CBI24402.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -2

Query: 97  CSSIGGTKCYFCSEGKMKLETGVVDCKVCKGA 2
           C+  GGTKC FC  GKMK ETG+VDCKVCKGA
Sbjct: 106 CAGNGGTKCVFCDNGKMKQETGLVDCKVCKGA 137


>ref|NP_189988.1| thylakoid lumenal P17.1 protein [Arabidopsis thaliana]
           gi|7594563|emb|CAB88130.1| putative protein [Arabidopsis
           thaliana] gi|26452306|dbj|BAC43239.1| unknown protein
           [Arabidopsis thaliana] gi|332644334|gb|AEE77855.1|
           thylakoid lumenal P17.1 protein [Arabidopsis thaliana]
          Length = 159

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 97  CSSIGGTKCYFCSEGKMKLETGVVDCKVCKGA 2
           C   GGTKC FC EGKMK+E+G+VDCKVCKG+
Sbjct: 111 CGGNGGTKCVFCLEGKMKVESGMVDCKVCKGS 142


>ref|XP_003569922.1| PREDICTED: uncharacterized protein LOC100843465 [Brachypodium
           distachyon]
          Length = 152

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -2

Query: 97  CSSIGGTKCYFCSEGKMKLETGVVDCKVCKGA 2
           C+  GGTKC FCS+GKMK E GVV+C+VCKGA
Sbjct: 104 CAGNGGTKCVFCSDGKMKAENGVVECRVCKGA 135


>ref|XP_002313628.1| predicted protein [Populus trichocarpa] gi|222850036|gb|EEE87583.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -2

Query: 97  CSSIGGTKCYFCSEGKMKLETGVVDCKVCKGA 2
           C+  GGTKC FC++GKMK ETG++DC+VCKGA
Sbjct: 114 CAGNGGTKCVFCNDGKMKQETGLMDCRVCKGA 145


>gb|EAY77083.1| hypothetical protein OsI_05045 [Oryza sativa Indica Group]
          Length = 145

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -2

Query: 97  CSSIGGTKCYFCSEGKMKLETGVVDCKVCKGA 2
           C+  GGTKC FC++GKMK+E GVV+C+VCKGA
Sbjct: 97  CAGNGGTKCVFCNDGKMKVENGVVECRVCKGA 128


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