BLASTX nr result

ID: Bupleurum21_contig00032663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032663
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523079.1| PREDICTED: probable inactive poly [ADP-ribos...    48   4e-07
gb|AAC18815.1| F17O7.2 [Arabidopsis thaliana]                          58   7e-07
ref|NP_177201.1| SRO3-like protein [Arabidopsis thaliana] gi|338...    58   7e-07
ref|XP_002888780.1| hypothetical protein ARALYDRAFT_476164 [Arab...    58   9e-07
ref|XP_002525374.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_003523079.1| PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5-like
           [Glycine max]
          Length = 330

 Score = 48.1 bits (113), Expect(2) = 4e-07
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = -2

Query: 440 SGVDNLEEPTKYIVWTCYMNSHILPCFVITYKAPLLTGKKNYKE 309
           SGVD+   PTKYI+W+  MN+H+LP +V++++     G +  +E
Sbjct: 196 SGVDSFSGPTKYIIWSNRMNTHVLPAYVVSFRVSSFKGMEKSEE 239



 Score = 30.8 bits (68), Expect(2) = 4e-07
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -3

Query: 325 KKITKKQLITKVRQIAGDNILKSVIELSRN 236
           KKI + +LI +VR+IAGD +L + I+  R+
Sbjct: 280 KKILRHELIQRVREIAGDKLLVAAIKSYRD 309


>gb|AAC18815.1| F17O7.2 [Arabidopsis thaliana]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = -2

Query: 440 SGVDNLEEPTKYIVWTCYMNSHILPCFVITYKAPLLTG 327
           SGVDNLE P KY++W+C MNS+ILP +++++K+ LL G
Sbjct: 198 SGVDNLENPRKYVIWSCNMNSYILPTYIVSFKSHLLRG 235


>ref|NP_177201.1| SRO3-like protein [Arabidopsis thaliana]
           gi|338819582|sp|O64592.2|SRO3_ARATH RecName:
           Full=Probable inactive poly [ADP-ribose] polymerase
           SRO3; AltName: Full=Protein SIMILAR TO RCD ONE 3
           gi|332196941|gb|AEE35062.1| SRO3-like protein
           [Arabidopsis thaliana]
          Length = 305

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = -2

Query: 440 SGVDNLEEPTKYIVWTCYMNSHILPCFVITYKAPLLTG 327
           SGVDNLE P KY++W+C MNS+ILP +++++K+ LL G
Sbjct: 198 SGVDNLENPRKYVIWSCNMNSYILPTYIVSFKSHLLRG 235


>ref|XP_002888780.1| hypothetical protein ARALYDRAFT_476164 [Arabidopsis lyrata subsp.
           lyrata] gi|297334621|gb|EFH65039.1| hypothetical protein
           ARALYDRAFT_476164 [Arabidopsis lyrata subsp. lyrata]
          Length = 304

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 22/38 (57%), Positives = 32/38 (84%)
 Frame = -2

Query: 440 SGVDNLEEPTKYIVWTCYMNSHILPCFVITYKAPLLTG 327
           SGVDNLE P KY++W+  MNS+ILP +++++K+PLL G
Sbjct: 197 SGVDNLENPRKYVIWSSNMNSYILPTYIVSFKSPLLRG 234


>ref|XP_002525374.1| conserved hypothetical protein [Ricinus communis]
           gi|223535337|gb|EEF37012.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 327

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = -2

Query: 440 SGVDNLEEPTKYIVWTCYMNSHILPCFVITYKAPLLTGKK 321
           SGVDNL +P +YI+W  +MNSHI P ++I++KAP   G K
Sbjct: 210 SGVDNLHKPRRYIIWNAFMNSHIFPTYIISFKAPSFNGIK 249


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