BLASTX nr result

ID: Bupleurum21_contig00032657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032657
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
gb|AAS80150.1| ACT11D09.4 [Cucumis melo]                              102   4e-20
ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
emb|CBI29649.3| unnamed protein product [Vitis vinifera]               98   8e-19

>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 559

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/90 (53%), Positives = 65/90 (72%)
 Frame = -3

Query: 278 RVDNALEKYVKMVDVGLRVIPPYANRWFSLLIENGRVLDCVPILNKMAEREPKPDVTTYD 99
           ++D+AL  + +MVDVGLRV+  + N  F  LI+NG+  DC  IL KM ER+PKPD T YD
Sbjct: 257 QIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYD 316

Query: 98  IVIRGLSEKGHMDAILELVGQMNRYGVGIT 9
           +VIRGL  +G +DA  EL+ Q+ RYG+G+T
Sbjct: 317 VVIRGLCNEGALDASRELLDQIMRYGIGLT 346


>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Cucumis sativus]
          Length = 871

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/90 (53%), Positives = 65/90 (72%)
 Frame = -3

Query: 278 RVDNALEKYVKMVDVGLRVIPPYANRWFSLLIENGRVLDCVPILNKMAEREPKPDVTTYD 99
           ++D+AL  + +MVDVGLRV+  + N  F  LI+NG+  DC  IL KM ER+PKPD T YD
Sbjct: 423 QIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYD 482

Query: 98  IVIRGLSEKGHMDAILELVGQMNRYGVGIT 9
           +VIRGL  +G +DA  EL+ Q+ RYG+G+T
Sbjct: 483 VVIRGLCNEGALDASRELLDQIMRYGIGLT 512


>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
          Length = 896

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/90 (52%), Positives = 64/90 (71%)
 Frame = -3

Query: 278 RVDNALEKYVKMVDVGLRVIPPYANRWFSLLIENGRVLDCVPILNKMAEREPKPDVTTYD 99
           ++D+AL  + +MVDVGLRV+  + N  F  LI+NG+  DC  IL KM ER+PKPD T YD
Sbjct: 449 QIDDALRVFNRMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYD 508

Query: 98  IVIRGLSEKGHMDAILELVGQMNRYGVGIT 9
           +VIRGL  +G +D   EL+ Q+ RYG+G+T
Sbjct: 509 VVIRGLCNEGALDTSRELLDQIMRYGIGLT 538


>ref|XP_003539383.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g10270-like [Glycine max]
          Length = 782

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/92 (48%), Positives = 66/92 (71%)
 Frame = -3

Query: 278 RVDNALEKYVKMVDVGLRVIPPYANRWFSLLIENGRVLDCVPILNKMAEREPKPDVTTYD 99
           R+D+AL  + +MVD GLRV+  + N  F  LI+NG+ +DC  IL+KM E++PKPD T Y+
Sbjct: 423 RIDDALRIFHRMVDSGLRVVATFGNTVFHELIKNGKAIDCAQILSKMGEKDPKPDPTCYE 482

Query: 98  IVIRGLSEKGHMDAILELVGQMNRYGVGITSA 3
           +VI+GL   G +D   EL+ ++ RYGVG+TS+
Sbjct: 483 VVIKGLCADGLLDKSRELLDEVMRYGVGVTSS 514


>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/90 (50%), Positives = 65/90 (72%)
 Frame = -3

Query: 278 RVDNALEKYVKMVDVGLRVIPPYANRWFSLLIENGRVLDCVPILNKMAEREPKPDVTTYD 99
           R D+AL+ + + VD GLRVI  +AN+ F  L+  G+  +CVP+L KM E++PKPD TTY+
Sbjct: 441 RADDALQMFNRFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYE 500

Query: 98  IVIRGLSEKGHMDAILELVGQMNRYGVGIT 9
           IVI+GL ++   DA  +L+GQM RY +G+T
Sbjct: 501 IVIKGLCKERLFDASRDLMGQMVRYNIGVT 530


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