BLASTX nr result
ID: Bupleurum21_contig00032656
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032656 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera] 57 1e-06 gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays] 55 6e-06 gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana] 55 6e-06 gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana] 55 6e-06 emb|CAN81570.1| hypothetical protein VITISV_025800 [Vitis vinifera] 55 6e-06 >emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera] Length = 650 Score = 57.4 bits (137), Expect = 1e-06 Identities = 24/47 (51%), Positives = 33/47 (70%) Frame = -1 Query: 143 LPKSTRTLKNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEPKN 3 LPK + + NHP DQ++ + S G+ TR SLRN C +FAF++ EPKN Sbjct: 109 LPKDWKFVINHPQDQIIGNSSSGVRTRSSLRNICNNFAFISQIEPKN 155 >gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays] Length = 1657 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = -1 Query: 179 DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9 D+ +EE P R + ++HP DQ+L DIS+G+TTR L NFC H++FV+ EP Sbjct: 1091 DDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 1149 >gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana] Length = 1048 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = -1 Query: 179 DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9 D+ +EE P R + ++HP DQ+L DIS+G+TTR L NFC H++FV+ EP Sbjct: 482 DDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 540 >gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana] Length = 1048 Score = 55.1 bits (131), Expect = 6e-06 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = -1 Query: 179 DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9 D+ +EE P R + ++HP DQ+L DIS+G+TTR L NFC H++FV+ EP Sbjct: 482 DDRVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 540 >emb|CAN81570.1| hypothetical protein VITISV_025800 [Vitis vinifera] Length = 582 Score = 55.1 bits (131), Expect = 6e-06 Identities = 23/55 (41%), Positives = 36/55 (65%) Frame = -1 Query: 167 IEEMTTVKLPKSTRTLKNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEPKN 3 ++ ++ LPK + + NHP DQ++ + S G+ TR SLRN C + AF++ EPKN Sbjct: 502 VQGXSSQDLPKDWKFVINHPXDQIIGNPSSGVRTRSSLRNICNNLAFISQIEPKN 556