BLASTX nr result

ID: Bupleurum21_contig00032656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032656
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera]    57   1e-06
gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]              55   6e-06
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]            55   6e-06
gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana]            55   6e-06
emb|CAN81570.1| hypothetical protein VITISV_025800 [Vitis vinifera]    55   6e-06

>emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera]
          Length = 650

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -1

Query: 143 LPKSTRTLKNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEPKN 3
           LPK  + + NHP DQ++ + S G+ TR SLRN C +FAF++  EPKN
Sbjct: 109 LPKDWKFVINHPQDQIIGNSSSGVRTRSSLRNICNNFAFISQIEPKN 155


>gb|AAL66759.1|AF464738_10 putative pol protein [Zea mays]
          Length = 1657

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = -1

Query: 179  DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9
            D+  +EE      P   R +  ++HP DQ+L DIS+G+TTR  L NFC H++FV+  EP
Sbjct: 1091 DDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 1149


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = -1

Query: 179 DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9
           D+  +EE      P   R +  ++HP DQ+L DIS+G+TTR  L NFC H++FV+  EP
Sbjct: 482 DDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 540


>gb|AEJ07927.1| Opie2 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
 Frame = -1

Query: 179 DNTNIEEMTTVKLPKSTRTL--KNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEP 9
           D+  +EE      P   R +  ++HP DQ+L DIS+G+TTR  L NFC H++FV+  EP
Sbjct: 482 DDRVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHYSFVSSIEP 540


>emb|CAN81570.1| hypothetical protein VITISV_025800 [Vitis vinifera]
          Length = 582

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/55 (41%), Positives = 36/55 (65%)
 Frame = -1

Query: 167 IEEMTTVKLPKSTRTLKNHPPDQLLSDISQGITTRRSLRNFCAHFAFVADFEPKN 3
           ++  ++  LPK  + + NHP DQ++ + S G+ TR SLRN C + AF++  EPKN
Sbjct: 502 VQGXSSQDLPKDWKFVINHPXDQIIGNPSSGVRTRSSLRNICNNLAFISQIEPKN 556


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