BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032636
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   125   4e-27
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   117   1e-24
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               116   2e-24
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   116   2e-24
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   115   3e-24

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  125 bits (314), Expect = 4e-27
 Identities = 55/110 (50%), Positives = 81/110 (73%)
 Frame = -3

Query: 331 MIPKGANPTEMSDFRPISLCSTVYKCVTKILANRLKIVMASIIDKAQSAFIPGRKISDNI 152
           ++PK  + T + +FRPI+ C+ +YK ++K+L NR+K ++  ++++AQS FIPGR I+DNI
Sbjct: 501 LLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNI 560

Query: 151 LLAQELFRGYNRSSGSPKCAIKVDLQKAFDSVSWNFLLKLLYLHNFSPKF 2
           LLA EL RGY R   SP+C +KVD++KA+DSV W+FL  LLY   F  +F
Sbjct: 561 LLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRF 610


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/110 (48%), Positives = 77/110 (70%)
 Frame = -3

Query: 331 MIPKGANPTEMSDFRPISLCSTVYKCVTKILANRLKIVMASIIDKAQSAFIPGRKISDNI 152
           +IPK     EM D+RPIS C+ +YK ++KI+ANRLK+V+   I   QSAF+  R + +N+
Sbjct: 404 LIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENV 463

Query: 151 LLAQELFRGYNRSSGSPKCAIKVDLQKAFDSVSWNFLLKLLYLHNFSPKF 2
           LLA E+ + Y++ S S +CA+K+D+ KAFDSV W FL+ +L   NF P+F
Sbjct: 464 LLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEF 513


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/110 (50%), Positives = 77/110 (70%)
 Frame = -3

Query: 331 MIPKGANPTEMSDFRPISLCSTVYKCVTKILANRLKIVMASIIDKAQSAFIPGRKISDNI 152
           +IPK     EM D+RPIS C+ +YK ++KI+ANRLK+++   I + QSAF+  R + +N+
Sbjct: 163 LIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENL 222

Query: 151 LLAQELFRGYNRSSGSPKCAIKVDLQKAFDSVSWNFLLKLLYLHNFSPKF 2
           LLA EL + Y++ S S +CAIK+D+ KAFDSV W+FL   L   NFSP F
Sbjct: 223 LLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTF 272


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/110 (50%), Positives = 77/110 (70%)
 Frame = -3

Query: 331  MIPKGANPTEMSDFRPISLCSTVYKCVTKILANRLKIVMASIIDKAQSAFIPGRKISDNI 152
            +IPK     EM D+RPIS C+ +YK ++KILANRLK+++ S I + QSAF+  R + +N+
Sbjct: 813  LIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENV 872

Query: 151  LLAQELFRGYNRSSGSPKCAIKVDLQKAFDSVSWNFLLKLLYLHNFSPKF 2
            LLA EL + Y++ S +P+CA+K+D+ KAFDSV W FLL  L   NF   F
Sbjct: 873  LLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETF 922


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/110 (51%), Positives = 73/110 (66%)
 Frame = -3

Query: 331 MIPKGANPTEMSDFRPISLCSTVYKCVTKILANRLKIVMASIIDKAQSAFIPGRKISDNI 152
           +IPK        D+RPI+ CST+YK ++KIL  RL+ V+  ++D AQ+ FIP R I DNI
Sbjct: 504 LIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNI 563

Query: 151 LLAQELFRGYNRSSGSPKCAIKVDLQKAFDSVSWNFLLKLLYLHNFSPKF 2
           LLA EL RGYNR   SP+C IKVD++KA+DSV W FL  +L    F   F
Sbjct: 564 LLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMF 613