BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032622
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   369   e-100
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   350   2e-94
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   350   2e-94
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   349   6e-94
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   345   9e-93

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 653

 Score =  369 bits (946), Expect = e-100
 Identities = 184/314 (58%), Positives = 232/314 (73%)
 Frame = -1

Query: 942  MKDLRPIALCNVLYKILAKVLANRLKVILPDIITENQSAFVPGRSITDNVLVAFEIINHM 763
            M+DLRPI+LCNV+YKILAK LANRL+ +L   I+  QS FV GR+ITDN+L+A EII+++
Sbjct: 93   MRDLRPISLCNVVYKILAKTLANRLQRVLDKCISVEQSGFVAGRTITDNILIALEIIHYL 152

Query: 762  KRKNGGSEGEIALKLDISKAYDRVDWNYLKYRMKTMGFCSRWIDWMMMCVTSVSYEVCFN 583
            K K  G +GE ALK+DISK YDRVDWNYL   M+ MGF   WI WM M VT VSY V  N
Sbjct: 153  KCKTWGIKGEAALKIDISKTYDRVDWNYLFSIMEKMGFNPIWIKWMRMSVTMVSYHVLVN 212

Query: 582  GSLIGPIVPKRGLRQGDPLSPYLFLLCVEGLSHSIERASAEGIIHGCEISPSAPVISHLL 403
               +GPI P RGLRQGDPLSPYLF+LC EG+S  I++A    I+HG ++   AP +SHLL
Sbjct: 213  DDRVGPIYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLL 272

Query: 402  FADDSFLFFKANRSETMAVKELLNVYEVQSGQSVNFQKSGIMFSANVRRDKQRELADILG 223
            FADDSFLFF+AN +ET A+K++L+ Y   S Q +N QKS I FS NV   K+  L+++L 
Sbjct: 273  FADDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLW 332

Query: 222  VTNDLTGSKYLGLPSLVGRSKKRVFGFIKDKVWSRIQSWKVKPLSKAGKLVLIKNVAQTI 43
            V+  +   KYLGLPS++GRSKK +F +IKD++W+RI     K LS+AGK VLIK+VAQ I
Sbjct: 333  VSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAI 392

Query: 42   PAYCMSCFLLPKSL 1
            P+YCMS FLLP S+
Sbjct: 393  PSYCMSVFLLPHSI 406


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  350 bits (899), Expect = 2e-94
 Identities = 175/314 (55%), Positives = 220/314 (70%)
 Frame = -1

Query: 942  MKDLRPIALCNVLYKILAKVLANRLKVILPDIITENQSAFVPGRSITDNVLVAFEIINHM 763
            MKD RPIALCNVLYKI+AKVLANRLKV+L   I+ENQSAFVP RSI DN L A EI++++
Sbjct: 939  MKDWRPIALCNVLYKIVAKVLANRLKVVLSKCISENQSAFVPERSILDNALAAIEIVHYI 998

Query: 762  KRKNGGSEGEIALKLDISKAYDRVDWNYLKYRMKTMGFCSRWIDWMMMCVTSVSYEVCFN 583
            +               IS AYDR++W YL+  M  MGFCS+W +W+MMCV SV Y V  N
Sbjct: 999  QY--------------ISTAYDRINWEYLRSIMGKMGFCSKWSEWIMMCVESVDYSVILN 1044

Query: 582  GSLIGPIVPKRGLRQGDPLSPYLFLLCVEGLSHSIERASAEGIIHGCEISPSAPVISHLL 403
            G  IGPI+P RGLRQGDPLSPYLF++C EGLS  I +A   G I G +I  +AP+ISHLL
Sbjct: 1045 GEKIGPIIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISHLL 1104

Query: 402  FADDSFLFFKANRSETMAVKELLNVYEVQSGQSVNFQKSGIMFSANVRRDKQRELADILG 223
            FADD FLFFKA   +   +K +L +YE  SGQS+NFQKS + +S NV    +  ++ ILG
Sbjct: 1105 FADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILG 1164

Query: 222  VTNDLTGSKYLGLPSLVGRSKKRVFGFIKDKVWSRIQSWKVKPLSKAGKLVLIKNVAQTI 43
            V   +   KYLG+PS+VGRS+   F F+K++VW +I SW  K LS+AG+  LIK+V Q+I
Sbjct: 1165 VQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQSI 1224

Query: 42   PAYCMSCFLLPKSL 1
            P Y MS F +PKS+
Sbjct: 1225 PFYIMSIFAIPKSI 1238


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  350 bits (899), Expect = 2e-94
 Identities = 176/314 (56%), Positives = 224/314 (71%)
 Frame = -1

Query: 942  MKDLRPIALCNVLYKILAKVLANRLKVILPDIITENQSAFVPGRSITDNVLVAFEIINHM 763
            MKD RPI+LC VLYKIL+K LANRLKVILP II+ NQSAFVP R ITDN LVAFEI + M
Sbjct: 504  MKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAM 563

Query: 762  KRKNGGSEGEIALKLDISKAYDRVDWNYLKYRMKTMGFCSRWIDWMMMCVTSVSYEVCFN 583
            KRK+    G  ALKLD+SKAYDRV+W +L+  MK MGFC  WID +M C++SVS+    N
Sbjct: 564  KRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVN 623

Query: 582  GSLIGPIVPKRGLRQGDPLSPYLFLLCVEGLSHSIERASAEGIIHGCEISPSAPVISHLL 403
            G + G + P RGLRQGDP+SPYLFLLC +  S  + +A++E  IHG +I   APV+SHL 
Sbjct: 624  GVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLF 683

Query: 402  FADDSFLFFKANRSETMAVKELLNVYEVQSGQSVNFQKSGIMFSANVRRDKQRELADILG 223
            FADDS LF KA+  E   V ++++ YE  SGQ VN  K+ ++FS +V R+++  + ++LG
Sbjct: 684  FADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLG 743

Query: 222  VTNDLTGSKYLGLPSLVGRSKKRVFGFIKDKVWSRIQSWKVKPLSKAGKLVLIKNVAQTI 43
            V       KYLGLP+++GRSKK  F  IK+++W ++Q WK K LS+ GK VLIK+VAQ I
Sbjct: 744  VKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAI 803

Query: 42   PAYCMSCFLLPKSL 1
            P Y MS F LP  L
Sbjct: 804  PTYMMSVFSLPSGL 817


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
            gi|241926916|gb|EES00061.1| hypothetical protein
            SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  349 bits (895), Expect = 6e-94
 Identities = 168/314 (53%), Positives = 233/314 (74%)
 Frame = -1

Query: 942  MKDLRPIALCNVLYKILAKVLANRLKVILPDIITENQSAFVPGRSITDNVLVAFEIINHM 763
            +KDLRPI+LCNVLYK+++KVLANRLK ILP+II+ +QSAFVPGR ITDNVL+A+EI++H+
Sbjct: 82   LKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEIVHHL 141

Query: 762  KRKNGGSEGEIALKLDISKAYDRVDWNYLKYRMKTMGFCSRWIDWMMMCVTSVSYEVCFN 583
            K    G+ G  A+KLD+SKAYDRV+W++L+  M+ MGF  +W+  +M CVT+V+Y++  N
Sbjct: 142  KSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVTTVTYKIKVN 201

Query: 582  GSLIGPIVPKRGLRQGDPLSPYLFLLCVEGLSHSIERASAEGIIHGCEISPSAPVISHLL 403
             S    I P+RGLRQGDPLSPYLF++C EGLS  +++A  +G I G +I   AP ++HL 
Sbjct: 202  DSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNHLF 261

Query: 402  FADDSFLFFKANRSETMAVKELLNVYEVQSGQSVNFQKSGIMFSANVRRDKQRELADILG 223
            FADDS +  +A  S+ + ++ +L+VYE  SGQ +N +KS +MFS N  +  +  +   L 
Sbjct: 262  FADDSLILMRARASDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSNLS 321

Query: 222  VTNDLTGSKYLGLPSLVGRSKKRVFGFIKDKVWSRIQSWKVKPLSKAGKLVLIKNVAQTI 43
            +T++ +  KYLGLP  +G+S+K+ F +IK K+WSRIQ W+ K LSKAGK +LIK VAQ+I
Sbjct: 322  ITDEASTEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQSI 381

Query: 42   PAYCMSCFLLPKSL 1
            P Y MSCF L K L
Sbjct: 382  PTYAMSCFDLTKGL 395


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  345 bits (885), Expect = 9e-93
 Identities = 162/314 (51%), Positives = 227/314 (72%)
 Frame = -1

Query: 942  MKDLRPIALCNVLYKILAKVLANRLKVILPDIITENQSAFVPGRSITDNVLVAFEIINHM 763
            M DLRPI+LCNV++KI +K+LANRLK +L  +++E QSAFVP RSITD++L+A E+++ +
Sbjct: 1056 MTDLRPISLCNVIFKIASKLLANRLKKVLDXVVSEAQSAFVPXRSITDSILIAHEVLHFL 1115

Query: 762  KRKNGGSEGEIALKLDISKAYDRVDWNYLKYRMKTMGFCSRWIDWMMMCVTSVSYEVCFN 583
            KRK  G  G  ALK+DISKAYD+++WNYL   ++ MGF S+W++WM MCV  VSY+V F 
Sbjct: 1116 KRKREGRIGYXALKIDISKAYDKLEWNYLFAVLEAMGFSSKWLEWMRMCVCXVSYKVXFG 1175

Query: 582  GSLIGPIVPKRGLRQGDPLSPYLFLLCVEGLSHSIERASAEGIIHGCEISPSAPVISHLL 403
            G L+GPI P RGLRQGD LSPYLF+L  EGLS  +++    G++HGC ++  AP +SHL 
Sbjct: 1176 GELLGPIYPTRGLRQGDXLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGAPXVSHLF 1235

Query: 402  FADDSFLFFKANRSETMAVKELLNVYEVQSGQSVNFQKSGIMFSANVRRDKQRELADILG 223
            FAD+S+LFFKA  SE+ ++K++L  Y+  SGQ +N  K  + FS N     +R +  IL 
Sbjct: 1236 FADBSYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTFSRNTDDVVKRGICSILQ 1295

Query: 222  VTNDLTGSKYLGLPSLVGRSKKRVFGFIKDKVWSRIQSWKVKPLSKAGKLVLIKNVAQTI 43
            V        YLG+P++VG++K+++F F++ KVW+RIQ+W  + LS+AGK + +K VAQ+I
Sbjct: 1296 VEEQADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSI 1355

Query: 42   PAYCMSCFLLPKSL 1
            P Y M   LLPK L
Sbjct: 1356 PTYVMQLLLLPKDL 1369