BLASTX nr result

ID: Bupleurum21_contig00032598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032598
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...   202   2e-50
ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein no...   192   3e-47
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...   191   4e-47
ref|XP_002331804.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_004165412.1| PREDICTED: rab3 GTPase-activating protein no...   184   6e-45

>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
           [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
           protein product [Vitis vinifera]
          Length = 457

 Score =  202 bits (514), Expect = 2e-50
 Identities = 108/160 (67%), Positives = 116/160 (72%)
 Frame = -1

Query: 494 KDSPRKGEKLTLSPSGTLAAIADSLGRILLLDTQALVVVRLWKGYRDASCLFVEXXXXXX 315
           KD PRKGEKLTLSPSGTLAAI DSLGRILLLDTQALVVVRLWKGYRDASCLF E      
Sbjct: 308 KDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFTEM----- 362

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNKNTGASSSTYHDYVKSDYCLCLAIHAP 135
                                         LV+K+T ASSS+Y++ VKSDYCLCLAIHAP
Sbjct: 363 ------------------------------LVSKDTAASSSSYYEPVKSDYCLCLAIHAP 392

Query: 134 RKGIVEIWQMRTGNRLLTLTCSKGSKLLQPTYRFGSSNGS 15
           RKGIVE+WQMRTG RLLT+ CSKGSK+LQPTYRFGSS GS
Sbjct: 393 RKGIVEVWQMRTGPRLLTVQCSKGSKILQPTYRFGSSMGS 432


>ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 460

 Score =  192 bits (487), Expect = 3e-47
 Identities = 101/160 (63%), Positives = 114/160 (71%)
 Frame = -1

Query: 494 KDSPRKGEKLTLSPSGTLAAIADSLGRILLLDTQALVVVRLWKGYRDASCLFVEXXXXXX 315
           KD PRKGEKLTLSPSGTLAAI DSLGRILLLDTQALVVVRLWKGYRDASCLF+E      
Sbjct: 310 KDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFMEM----- 364

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNKNTGASSSTYHDYVKSDYCLCLAIHAP 135
                                         LVNK+  +SSS+Y + +KSDYCLCLAIHAP
Sbjct: 365 ------------------------------LVNKDIASSSSSYSEPLKSDYCLCLAIHAP 394

Query: 134 RKGIVEIWQMRTGNRLLTLTCSKGSKLLQPTYRFGSSNGS 15
           RKGI+EIWQMRTG RL T++C+KGSK+LQP+YRFG+S  S
Sbjct: 395 RKGIIEIWQMRTGQRLRTISCTKGSKMLQPSYRFGASVSS 434


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 459

 Score =  191 bits (486), Expect = 4e-47
 Identities = 101/160 (63%), Positives = 114/160 (71%)
 Frame = -1

Query: 494 KDSPRKGEKLTLSPSGTLAAIADSLGRILLLDTQALVVVRLWKGYRDASCLFVEXXXXXX 315
           KD PRKGEKLTLSPSGTLAAI DSLGRILLLDTQALVVVRLWKGYRDASCLF+E      
Sbjct: 309 KDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFMEM----- 363

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNKNTGASSSTYHDYVKSDYCLCLAIHAP 135
                                         LVNK+  +SSS+Y + +KSDYCLCLAIHAP
Sbjct: 364 ------------------------------LVNKDIASSSSSYSEPLKSDYCLCLAIHAP 393

Query: 134 RKGIVEIWQMRTGNRLLTLTCSKGSKLLQPTYRFGSSNGS 15
           RKGI+EIWQMRTG RL T++C+KGSK+LQP+YRFG+S  S
Sbjct: 394 RKGIIEIWQMRTGPRLRTISCAKGSKMLQPSYRFGASMSS 433


>ref|XP_002331804.1| predicted protein [Populus trichocarpa] gi|222874500|gb|EEF11631.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  191 bits (486), Expect = 4e-47
 Identities = 100/157 (63%), Positives = 112/157 (71%)
 Frame = -1

Query: 494 KDSPRKGEKLTLSPSGTLAAIADSLGRILLLDTQALVVVRLWKGYRDASCLFVEXXXXXX 315
           KD PRKGEKLTLSPSGTLAAI DSLGRILLLDTQALVVVRLWKGYRDA+CLF+E      
Sbjct: 205 KDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM----- 259

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNKNTGASSSTYHDYVKSDYCLCLAIHAP 135
                                         LV+ N+  +SS++H+  KSDYCLCLAIHAP
Sbjct: 260 ------------------------------LVSMNSAGASSSHHEPSKSDYCLCLAIHAP 289

Query: 134 RKGIVEIWQMRTGNRLLTLTCSKGSKLLQPTYRFGSS 24
           RKGI+E+WQMRTG RLLT+ C+KGSKLLQPTYRFGSS
Sbjct: 290 RKGIIEVWQMRTGPRLLTIQCAKGSKLLQPTYRFGSS 326


>ref|XP_004165412.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Cucumis sativus]
          Length = 456

 Score =  184 bits (467), Expect = 6e-45
 Identities = 101/162 (62%), Positives = 111/162 (68%), Gaps = 2/162 (1%)
 Frame = -1

Query: 494 KDSPRKGEKLTLSPSGTLAAIADSLGRILLLDTQALVVVRLWKGYRDASCLFVEXXXXXX 315
           KD PRKGEKLTLSPSGTLAAI DSLGRILLLDTQALVVVRLWKGYRDA+CLF+E      
Sbjct: 306 KDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM----- 360

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNKNTGASSSTYHDY--VKSDYCLCLAIH 141
                                         LVN++T +SSS   DY   K+DYCLCLAIH
Sbjct: 361 ------------------------------LVNRDTASSSSNSMDYEPAKNDYCLCLAIH 390

Query: 140 APRKGIVEIWQMRTGNRLLTLTCSKGSKLLQPTYRFGSSNGS 15
           APRKGIVEIWQMRTG RL T+ C+KGSKLLQP++R GSS  S
Sbjct: 391 APRKGIVEIWQMRTGRRLRTIRCTKGSKLLQPSFRLGSSMDS 432


Top