BLASTX nr result
ID: Bupleurum21_contig00032595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00032595
(622 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 115 8e-24
ref|XP_002520623.1| conserved hypothetical protein [Ricinus comm... 97 2e-18
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 76 6e-18
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 66 2e-15
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 66 2e-15
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 115 bits (287), Expect = 8e-24
Identities = 50/122 (40%), Positives = 72/122 (59%)
Frame = +3
Query: 3 NNRDAELIKRIPIPAFDKHDSWFWLFDDKGVFTVKSCYRKLQGEHNTSQGGFWKKLWAIK 182
N RD LI+ IP+ + DSW+WLFDDKG + VK+CYR LQG+ + FW K W +K
Sbjct: 376 NGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLGRPETSFWNKFWKLK 435
Query: 183 LPGKIVNFMWRACTSCLPTAVALVTKKVQIDVKCPWCAPNTK*RCHTCAFYVFFCEVSVG 362
+P K+ N MW+ C++C+ TA+ L + V +D C WC + T +F C ++
Sbjct: 436 IPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPE----TLFHVLFGCSMARE 491
Query: 363 CW 368
CW
Sbjct: 492 CW 493
Score = 55.5 bits (132), Expect = 8e-06
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +1
Query: 310 EDAIHVLFTCSFARSVWDAGGLQHILQILPGDTVFEVMQRVYDVATSEQIVLITLLCWNI 489
E HVLF CS AR WD G + + +Q + + + L+C ++
Sbjct: 477 ETLFHVLFGCSMARECWDLLGFR--FSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSL 534
Query: 490 WNRRNKWVWDKINMSVFGVQAAAMNLLD 573
WN+RN WVW+K + + +GV + A LL+
Sbjct: 535 WNQRNHWVWNKQSNTTYGVISPANQLLE 562
>ref|XP_002520623.1| conserved hypothetical protein [Ricinus communis]
gi|223540184|gb|EEF41759.1| conserved hypothetical
protein [Ricinus communis]
Length = 102
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +3
Query: 69 FWLFDDKGVFTVKSCYRKLQGEHNTSQGGFWKKLWAIKLPGKIVNFMWRACTSCLPTAVA 248
+W FDD G +VKSCYR +GE + S GFW+KLW +KL K++NF WRAC+ CLPTA
Sbjct: 2 YWGFDDMGRCSVKSCYRLSRGEEDISYSGFWQKLWRLKLQAKVLNFFWRACSGCLPTADR 61
Query: 249 LVTKKVQIDVKCPWC 293
L+T KV + CP C
Sbjct: 62 LLTMKVSVPEICPVC 76
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 76.3 bits (186), Expect(2) = 6e-18
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Frame = +3
Query: 9 RDAELIKRIPIPAFDKHDSWFWLFDDKGVFTVKS------CYRKLQG--EHNTSQGGFWK 164
RDA+LI IP+P + D W FD +G +T +S C+R+ + W
Sbjct: 450 RDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWA 509
Query: 165 KLWAIKLPGKIVNFMWRACTSCLPTAVALVTKKVQIDVKCPWC 293
+LW + P KI+NF WRA +CLPT AL + V + CP C
Sbjct: 510 QLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPIC 552
Score = 40.0 bits (92), Expect(2) = 6e-18
Identities = 27/94 (28%), Positives = 39/94 (41%)
Frame = +1
Query: 298 RIQNEDAIHVLFTCSFARSVWDAGGLQHILQILPGDTVFEVMQRVYDVATSEQIVLITLL 477
R + E +H L C AR VWD GL +LQ G V + + ++ +
Sbjct: 553 RSELETTLHALVECVAARDVWDESGLA-MLQGNFGSFV-DWLATMFAYCDFVVFAKYLAV 610
Query: 478 CWNIWNRRNKWVWDKINMSVFGVQAAAMNLLDDW 579
CW +W RRN VW+ V +L+ W
Sbjct: 611 CWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESW 644
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 65.9 bits (159), Expect(2) = 2e-15
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Frame = +3
Query: 12 DAELIKRIPIPAFDKHDSWFWLFDDKGVFTVKSCY---------RKLQGEHNTSQGG--- 155
D +I+ IP+ + D W +D+KG+F+VKS Y R+ +G S G
Sbjct: 1115 DVNMIRTIPVH-IEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTER 1173
Query: 156 --FWKKLWAIKLPGKIVNFMWRACTSCLPTAVALVTKKVQIDVKCPWC 293
+WKK+W ++LPGK+ +F+WR + L V L + + +D +C C
Sbjct: 1174 EMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIIC 1221
Score = 41.6 bits (96), Expect(2) = 2e-15
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 307 NEDAIHVLFTCSFARSVWDAGGLQHILQILPGD-TVFEVMQRVYDVATSEQIVLITLLCW 483
NEDA H+ F C + VW L+ + Q L + EVM+ V++ +++I+L ++ W
Sbjct: 1225 NEDAGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFN-RPAKEILLASITLW 1283
Query: 484 NIWNRRNK 507
W+ RN+
Sbjct: 1284 QWWSERNR 1291
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 65.9 bits (159), Expect(2) = 2e-15
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Frame = +3
Query: 12 DAELIKRIPIPAFDKHDSWFWLFDDKGVFTVKSCY---------RKLQGEHNTSQGG--- 155
D +I+ IP+ + D W +D+KG+F+VKS Y R+ +G S G
Sbjct: 222 DVNMIRTIPVH-IEMDDMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTER 280
Query: 156 --FWKKLWAIKLPGKIVNFMWRACTSCLPTAVALVTKKVQIDVKCPWC 293
+WKK+W ++LPGK+ +F+WR + L V L + + +D +C C
Sbjct: 281 EMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIIC 328
Score = 41.6 bits (96), Expect(2) = 2e-15
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 307 NEDAIHVLFTCSFARSVWDAGGLQHILQILPGD-TVFEVMQRVYDVATSEQIVLITLLCW 483
NEDA H+ F C + VW L+ + Q L + EVM+ V++ +++I+L ++ W
Sbjct: 332 NEDAGHLFFKCKKVKKVWQENNLEILRQELAEKRSGREVMETVFN-RPAKEILLASITLW 390
Query: 484 NIWNRRNK 507
W+ RN+
Sbjct: 391 QWWSERNR 398