BLASTX nr result

ID: Bupleurum21_contig00032559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032559
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...    76   3e-12
gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. ...    75   6e-12
ref|NP_085549.1| hypothetical protein ArthMp082 [Arabidopsis tha...    74   1e-11
gb|AAM15413.1| hypothetical protein [Arabidopsis thaliana]             74   1e-11
gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-...    73   3e-11

>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
           gi|223546930|gb|EEF48427.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 603

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 16/121 (13%)
 Frame = -2

Query: 315 EIFVGVRRAVKAN---ADCNGRW------------SYYEDRREEGSPRNVRGRIXXXXXX 181
           ++F+GVRRAV+ N   +DC  RW                  +EEG  RN RG++      
Sbjct: 223 KMFIGVRRAVRPNNGGSDC-ARWREQIACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVM 281

Query: 180 XXXXXXXXXXXXEVVYYPGAG-FADFVVNAEKVEGSYPAFWKMGSRVKMAVEREDSSRMT 4
                       EVVYYP AG ++DFVV  + V+G+    W  G RVKMA+E EDSSRMT
Sbjct: 282 EAVERAAQGFSFEVVYYPRAGWYSDFVVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMT 341

Query: 3   W 1
           W
Sbjct: 342 W 342


>gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
 Frame = -2

Query: 315 EIFVGVRRAVKANADCNGRWSYYED----------RREEGSPRNVR---GRIXXXXXXXX 175
           E+F+GVRRA  +N   +G  SYY D          ++E+G  +  R   G++        
Sbjct: 205 EMFIGVRRAPISNK--SGGSSYYGDEYFPGGYYGVKKEDGGEKFRRVGMGKLTAEAVSEA 262

Query: 174 XXXXXXXXXXEVVYYPGAGFADFVVNAEKVEGSYPAFWKMGSRVKMAVEREDSSRMTW 1
                     EVVYYP AG+++FVV AE VE S   +W  G+RVKMA+E EDSSR+TW
Sbjct: 263 IGKASRGLPFEVVYYPTAGWSEFVVRAEDVEASTNVYWTPGTRVKMAMETEDSSRITW 320


>ref|NP_085549.1| hypothetical protein ArthMp082 [Arabidopsis thaliana]
           gi|45477051|sp|P92530.1|M940_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00940;
           AltName: Full=ORF164 gi|1785751|emb|CAA69835.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 164

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 17/122 (13%)
 Frame = -2

Query: 315 EIFVGVRRA-VKANADCNGRW------SYYED-----RREEGSP-----RNVRGRIXXXX 187
           E+F+GVRRA + +N      +      SYY+      + ++GS      R  +G++    
Sbjct: 7   EMFIGVRRAPISSNVGGTSFYGGDEYCSYYQSNGGVAKEDDGSAKKGFRRTGKGKLTAEA 66

Query: 186 XXXXXXXXXXXXXXEVVYYPGAGFADFVVNAEKVEGSYPAFWKMGSRVKMAVEREDSSRM 7
                         EVVYYP AG++DFVV AE VE S   FW  G+RVKMA+E EDSSR+
Sbjct: 67  VSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRI 126

Query: 6   TW 1
           TW
Sbjct: 127 TW 128


>gb|AAM15413.1| hypothetical protein [Arabidopsis thaliana]
          Length = 153

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 17/122 (13%)
 Frame = -2

Query: 315 EIFVGVRRA-VKANADCNGRW------SYYED-----RREEGSP-----RNVRGRIXXXX 187
           E+F+GVRRA + +N      +      SYY+      + ++GS      R  +G++    
Sbjct: 7   EMFIGVRRAPISSNVGGTSFYGGDEYCSYYQSNGGVAKEDDGSAKKGFRRTGKGKLTAEA 66

Query: 186 XXXXXXXXXXXXXXEVVYYPGAGFADFVVNAEKVEGSYPAFWKMGSRVKMAVEREDSSRM 7
                         EVVYYP AG++DFVV AE VE S   FW  G+RVKMA+E EDSSR+
Sbjct: 67  VSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRI 126

Query: 6   TW 1
           TW
Sbjct: 127 TW 128


>gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
          Length = 596

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 16/121 (13%)
 Frame = -2

Query: 315 EIFVGVRRAVKANADCNGRW-------SYYED----RREEGSP-----RNVRGRIXXXXX 184
           E+F+GVRR   +++D    +        YY      + ++GSP     R+  G++     
Sbjct: 212 EMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAV 271

Query: 183 XXXXXXXXXXXXXEVVYYPGAGFADFVVNAEKVEGSYPAFWKMGSRVKMAVEREDSSRMT 4
                        EVV+YP AG+++FVV AE VE S   +W  G+RVKMA+E EDSSR+T
Sbjct: 272 TDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRIT 331

Query: 3   W 1
           W
Sbjct: 332 W 332


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