BLASTX nr result

ID: Bupleurum21_contig00032555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032555
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329338.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
emb|CAN61843.1| hypothetical protein VITISV_004818 [Vitis vinifera]   104   9e-21
ref|XP_002516739.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002305822.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003543913.1| PREDICTED: uncharacterized protein LOC100779...    90   2e-16

>ref|XP_002329338.1| predicted protein [Populus trichocarpa] gi|222870792|gb|EEF07923.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  105 bits (263), Expect = 3e-21
 Identities = 66/120 (55%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
 Frame = +1

Query: 61  NPNFDSTFTLLDPKSLILSQFNSDNNL---LRLTTGTFL-ERGPRYKAYADLRESKLRLK 228
           NP+  S F  LDP SLILSQ ++D++    LRLTT +++ ERGPRY AYADLRE+KLR+K
Sbjct: 15  NPSMQSLFQALDPISLILSQNSADSDHPVPLRLTTESYIMERGPRYGAYADLRETKLRMK 74

Query: 229 M-KSPPFDHEPTTVTPPR--KQVKFQGSLIPQPPRRKASSFVAQSVPDFSEVLRKENRKP 399
           M +   ++      TPP+  KQVKFQ +L      RK  S +AQSVPDFS  LRKENRKP
Sbjct: 75  MLRQQEYEENDIRQTPPKKQKQVKFQENL---GNSRKGLSVLAQSVPDFSATLRKENRKP 131


>emb|CAN61843.1| hypothetical protein VITISV_004818 [Vitis vinifera]
          Length = 220

 Score =  104 bits (259), Expect = 9e-21
 Identities = 67/118 (56%), Positives = 80/118 (67%), Gaps = 5/118 (4%)
 Frame = +1

Query: 61  NPNFDSTFTLLDPKSLILSQFNSDNNL---LRLTTGTFL-ERGPRYKAYADLRESKLRLK 228
           N    S F  LDP SLILSQ NSD +    L+LTT  ++ ERGPRY+AYA+LRESKLR K
Sbjct: 15  NHPLGSFFAALDPMSLILSQ-NSDPDRPISLQLTTDCYIMERGPRYRAYAELRESKLRRK 73

Query: 229 -MKSPPFDHEPTTVTPPRKQVKFQGSLIPQPPRRKASSFVAQSVPDFSEVLRKENRKP 399
             +    DHE + +TPP+KQVKFQG+       R+ SS + QSVPDFS  LRKENRKP
Sbjct: 74  NARQEATDHE-SRLTPPKKQVKFQGN--SNAGGRRGSSVLTQSVPDFSAALRKENRKP 128


>ref|XP_002516739.1| conserved hypothetical protein [Ricinus communis]
           gi|223544112|gb|EEF45637.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score =  100 bits (248), Expect = 2e-19
 Identities = 64/118 (54%), Positives = 74/118 (62%), Gaps = 5/118 (4%)
 Frame = +1

Query: 61  NPNFDSTFTLLDPKSLILSQFNSDNNL---LRLTTGTFL-ERGPRYKAYADLRESKLRLK 228
           NP        LDP SLILSQ + D+N    L+L T  ++ ERGPRY+AYADLRESKLR+K
Sbjct: 5   NPTAQCLLHSLDPISLILSQNSLDSNQPVPLKLATDCYIMERGPRYRAYADLRESKLRMK 64

Query: 229 MKSPPFDHE-PTTVTPPRKQVKFQGSLIPQPPRRKASSFVAQSVPDFSEVLRKENRKP 399
              P    E     TP +KQVKFQ +L      RK  S +AQSVPDFS  LRKENRKP
Sbjct: 65  SLRPEESEECEFRQTPVKKQVKFQENL---TTTRKGYSILAQSVPDFSATLRKENRKP 119


>ref|XP_002305822.1| predicted protein [Populus trichocarpa] gi|222848786|gb|EEE86333.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
 Frame = +1

Query: 61  NPNFDSTFTLLDPKSLILSQFNSDNNL---LRLTTGTFL-ERGPRYKAYADLRESKLRLK 228
           NP+  S F  +D  SLILSQ ++D++    L+LTT +++ ERGPRY+AYA LRE KLR+ 
Sbjct: 15  NPSVQSLFQAIDHISLILSQNSADSDQPVPLKLTTESYIMERGPRYRAYAKLREKKLRMT 74

Query: 229 M-KSPPFDHEPTTVTPPRKQVKFQGSLIPQPPRRKASSFVAQSVPDFSEVLRKEN 390
           M K   ++      TPP+KQ KF G+L      RK SS +AQSVPDFS  LRKE+
Sbjct: 75  MLKQQEYEETDFKQTPPKKQEKFHGNL---GNSRKGSSILAQSVPDFSATLRKES 126


>ref|XP_003543913.1| PREDICTED: uncharacterized protein LOC100779423 [Glycine max]
          Length = 228

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 65/128 (50%), Positives = 77/128 (60%), Gaps = 14/128 (10%)
 Frame = +1

Query: 58  INPNFDSTFTLLDPKSLILSQ-FNSDNNL-LRLTTGT--FLERGPRYKAYADLRESKLRL 225
           +NP  +     LDP SLIL+Q  NSD+   LRLT+     LERGP+Y AYA+LRE++L +
Sbjct: 18  LNPTLEPLLHALDPISLILNQNSNSDHPFPLRLTSADSFILERGPKYTAYAELRETRLHM 77

Query: 226 K--MKSPPFDHE-----PTT--VTPPRK-QVKFQGSLIPQPPRRKASSFVAQSVPDFSEV 375
           K  M+     HE     P T  VTPPRK QVKFQ          K S  +AQSVPDFS  
Sbjct: 78  KCLMQEQQQQHEAQELEPRTKPVTPPRKKQVKFQAC----EGHSKGSFSIAQSVPDFSSA 133

Query: 376 LRKENRKP 399
           LRKENRKP
Sbjct: 134 LRKENRKP 141


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