BLASTX nr result

ID: Bupleurum21_contig00032550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032550
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39734.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-li...   224   2e-56
ref|XP_002323787.1| predicted protein [Populus trichocarpa] gi|2...   199   5e-49
ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like...   190   2e-46
ref|XP_002519473.1| conserved hypothetical protein [Ricinus comm...   189   3e-46

>emb|CBI39734.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  226 bits (575), Expect = 4e-57
 Identities = 123/225 (54%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 676 VEEEACTLRFYKVVLGWDYLRLLQQSGQKNKNWKNDDL-GLKEVKYTYKDVNDYISTYEP 500
           +EEEAC LRF K+VLGWDY++LL++S + ++N  +    GL++VK TY D++DY++T+EP
Sbjct: 9   LEEEACILRFCKIVLGWDYVQLLKESKKNSRNIGDGSAPGLRKVKDTYTDIDDYLATFEP 68

Query: 499 LLFEEVKAQIVQQKDEEEDVGWKTGIIVECNEADGFHLPLV--FGEDWESIQQNDXXXXX 326
           LLFEEVKAQIVQ +DEEE   WK  I+ EC+E DGF +P+V    E+ ESI QND     
Sbjct: 69  LLFEEVKAQIVQGRDEEEVSEWKFAIVRECSETDGFSIPVVGYKAEEGESISQNDLLLLS 128

Query: 325 XXXXXXXXXLPTTYAFGLVEYMQLGKIRLRMQLNGEANGSNADEMKSCPRLLRMRP---- 158
                    LPTTYAF L E+ Q   +R+RM L+GE  G N DE+ SCPRLL M      
Sbjct: 129 KTKFQEGTRLPTTYAFALAEHRQGDLLRVRMWLDGEVKGINTDEVVSCPRLLSMHSLIGN 188

Query: 157 LIKEAQKTWVIKKICSLSTIVREYVGLHSIGSLPFKDLILKAAES 23
           LI +  +   I KICSLSTIVREY+GL SIGSLPFKDLIL A +S
Sbjct: 189 LINDPNRGLYILKICSLSTIVREYIGLQSIGSLPFKDLILTATDS 233


>ref|XP_002265434.1| PREDICTED: probable helicase DDB_G0274399-like [Vitis vinifera]
          Length = 831

 Score =  224 bits (570), Expect = 2e-56
 Identities = 126/227 (55%), Positives = 154/227 (67%), Gaps = 9/227 (3%)
 Frame = -1

Query: 676 VEEEACTLRFYKVVLGWDYLRLLQQSGQKNKNWKNDDL--GLKEVKYTYKDVNDYISTYE 503
           +EEEAC LRF K+VLGWDY++LL++S QKN     D    GL++VK TY D++DY++T+E
Sbjct: 9   LEEEACILRFCKIVLGWDYVQLLKESKQKNSRNIGDGSAPGLRKVKDTYTDIDDYLATFE 68

Query: 502 PLLFEEVKAQIVQQKDEEEDVGWKTGIIVECNEADGFHLPLV--FGEDWESIQQND-XXX 332
           PLLFEEVKAQIVQ +DEEE   WK  I+ EC+E DGF +P+V    E+ ESI QND    
Sbjct: 69  PLLFEEVKAQIVQGRDEEEVSEWKFAIVRECSETDGFSIPVVGYKAEEGESISQNDLLLL 128

Query: 331 XXXXXXXXXXXLPTTYAFGLVEYMQLGKIRLRMQLNGEANGSNADEMKSCPRLLRMRP-- 158
                      LPTTYAF L E+ Q   +R+RM L+GE  G N DE+ SCPRLL M    
Sbjct: 129 SKTKVPTQGTRLPTTYAFALAEHRQGDLLRVRMWLDGEVKGINTDEVVSCPRLLSMHSLI 188

Query: 157 --LIKEAQKTWVIKKICSLSTIVREYVGLHSIGSLPFKDLILKAAES 23
             LI +  +   I KICSLSTIVREY+GL SIGSLPFKDLIL A +S
Sbjct: 189 GNLINDPNRGLYILKICSLSTIVREYIGLQSIGSLPFKDLILTATDS 235


>ref|XP_002323787.1| predicted protein [Populus trichocarpa] gi|222866789|gb|EEF03920.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  199 bits (505), Expect = 5e-49
 Identities = 118/232 (50%), Positives = 146/232 (62%), Gaps = 8/232 (3%)
 Frame = -1

Query: 673 EEEACTLRFYKVVLGWDYLRLLQQSG-QKNKNWKNDDLGLKEVKYTYKDVNDYISTYEPL 497
           EEEA  +RF K++LGWDY  LL ++  QK +  K    GL++VK TYKDV+DY++T+EPL
Sbjct: 11  EEEASFVRFCKIILGWDYFGLLTEAAKQKKERGKGGGSGLRQVKNTYKDVDDYLATFEPL 70

Query: 496 LFEEVKAQIVQQKDEEEDVGWKTGIIVECNEADGFHLPLV-FGED-WESIQQND-XXXXX 326
           LFEEVKAQI+Q+KD+EE   W   ++VECNE++GF LP V +G+D  E I QND      
Sbjct: 71  LFEEVKAQIIQKKDDEEVTEWVLRLVVECNESEGFLLPSVTYGDDEGEKIVQNDLLLLSE 130

Query: 325 XXXXXXXXXLPTTYAFGLVEYMQLGKIRLRMQLNGEANGSNADEMKSCPRLLRMRPLIKE 146
                     P  YAF LVE  Q   +RLRM L GE    N D ++S  RLL+M  LI  
Sbjct: 131 DQFKEGGGKFPQVYAFALVEQRQHNLLRLRMFLAGEVMNLNTDVIESRTRLLKMHGLITS 190

Query: 145 A----QKTWVIKKICSLSTIVREYVGLHSIGSLPFKDLILKAAESHEYSEDR 2
                +K     KICSLSTI REY  L SIGSLPFKDLIL AA+    SED+
Sbjct: 191 PGLLHEKRLFSVKICSLSTISREYFALRSIGSLPFKDLILTAADKSSGSEDQ 242


>ref|XP_004134910.1| PREDICTED: probable helicase MAGATAMA 3-like [Cucumis sativus]
          Length = 841

 Score =  190 bits (483), Expect = 2e-46
 Identities = 107/235 (45%), Positives = 143/235 (60%), Gaps = 15/235 (6%)
 Frame = -1

Query: 679 KVEEEACTLRFYKVVLGWDYLRLLQQSGQKNKN-WKNDDLGLKEVKYTYKDVNDYISTYE 503
           K  EE+ T R +K++L WDY RLL+ S ++ +N      LGLKEVK TYKDV+DY ST+E
Sbjct: 7   KAVEESVTSRLFKIILSWDYFRLLKNSKKRKENDGDGASLGLKEVKSTYKDVDDYTSTFE 66

Query: 502 PLLFEEVKAQIVQQKDEEEDVGWKTGIIVECNEADGFHLP-LVF----------GEDWES 356
           PLL EE+KAQI+Q+ ++EE   WK   I+EC+E +GFH P +V+           E  + 
Sbjct: 67  PLLLEEIKAQIIQRNEDEEASDWKFRAIMECSEVNGFHFPEMVYLRDEDLKDEDSEKGDF 126

Query: 355 IQQNDXXXXXXXXXXXXXXLPTTYAFGLVEYMQLGKIRLRMQLNGEANGSNADEMKSCPR 176
           +  ND              LPTTYAF LVE  Q  K+RLRM L GE    + + + S PR
Sbjct: 127 LSPNDLLLLSKEKFQENTKLPTTYAFALVESRQQSKLRLRMYLAGEVTHKDVEAIVSSPR 186

Query: 175 LLRMRPLIKEAQKTWVI---KKICSLSTIVREYVGLHSIGSLPFKDLILKAAESH 20
           LL++R  I  + K  +     KICSLSTI+REY+ L SI SLPFK++IL A + +
Sbjct: 187 LLKVRSHITSSSKDGIYIYSLKICSLSTIIREYIALWSISSLPFKEMILAATDKN 241


>ref|XP_002519473.1| conserved hypothetical protein [Ricinus communis]
           gi|223541336|gb|EEF42887.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 826

 Score =  189 bits (481), Expect = 3e-46
 Identities = 112/238 (47%), Positives = 151/238 (63%), Gaps = 12/238 (5%)
 Frame = -1

Query: 679 KVEEEACTLRFYKVVLGWDYLRLLQQ--SGQKNKNWKNDD----LGLKEVKYTYKDVNDY 518
           K+ EEA   RF K+VLGWDY  LL++    ++ +  K+D+     GL++VK +YKDV++Y
Sbjct: 7   KLLEEASFARFCKIVLGWDYFSLLKEYDKEKQKERGKSDNGDATSGLRQVKNSYKDVDEY 66

Query: 517 ISTYEPLLFEEVKAQIVQQKDEEEDVGWKTGIIVECNEADGFHLPLVF--GEDWESIQQN 344
           + T+EPLLFEEVKAQI+Q+KD+EE       +++ECNEA+GF  P V   GE+ E I QN
Sbjct: 67  LETFEPLLFEEVKAQIIQRKDDEEVTTSVMRLVLECNEAEGFLFPAVSFGGEEDERISQN 126

Query: 343 DXXXXXXXXXXXXXXLPTTYAFGLVEYMQLGKIRLRMQLNGEANGSNADEMKSCPRLLRM 164
           D              LP  +AF LVE+ Q  + RLRM L+GE    N D +++ PRLL+M
Sbjct: 127 DLLLLSKEKIKDSRKLPEVHAFALVEHRQHDRYRLRMFLDGEVRQLNFDNLETHPRLLKM 186

Query: 163 RPLI----KEAQKTWVIKKICSLSTIVREYVGLHSIGSLPFKDLILKAAESHEYSEDR 2
           R  +    K  +K     KICSLSTI REY+ L SI SLPFKDLILKA + +  SE++
Sbjct: 187 RAFMTAPRKPEEKPIFSLKICSLSTISREYLALRSISSLPFKDLILKATDINAGSEEQ 244


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