BLASTX nr result

ID: Bupleurum21_contig00032531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032531
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...   149   9e-34
ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-contai...   147   4e-33
emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]   147   4e-33
ref|XP_002509831.1| DNA binding protein, putative [Ricinus commu...   142   1e-31
ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   137   3e-30

>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
           predicted protein [Populus trichocarpa]
          Length = 648

 Score =  149 bits (375), Expect = 9e-34
 Identities = 92/211 (43%), Positives = 120/211 (56%), Gaps = 11/211 (5%)
 Frame = +3

Query: 216 SRKRKWQSISISGMLNWVTQAAKHSDDPAIGIVPGPSKWNDYGTEEYWVQALLAREALLV 395
           SRKRK + ++   MLNWV Q AK  DDP+IG+     KW ++   E W+QA+ AREALL 
Sbjct: 274 SRKRKREPLT--RMLNWVIQIAKCPDDPSIGVRSPQFKWKNHKGNELWLQAIRAREALLH 331

Query: 396 KRPICANLEE-------FSLQKKLKMHPLMYEDKNV--HQSAEGARSSKRLSS-SKPQFC 545
           +R    N+E+        + Q   KMHP M+ED +V     AE +R SKRL + +KP  C
Sbjct: 332 RRHFDPNIEQSLLQVYNMNFQDNRKMHPSMFEDVSVLSEHFAERSRCSKRLPALAKPDVC 391

Query: 546 PCCN-LGRTTRKFTSPCKAETHNNLMVPSSPMTMEELSPDASEALHFDEALIRHVSVGPS 722
            CCN       K TSP K E  N L      + ++  S +A+     D  + RHV+VGP 
Sbjct: 392 SCCNSCSAPQSKSTSPLKTECENGL--KEQELAVDLSSKNATFDGSGDGHVRRHVAVGPL 449

Query: 723 FQAEIPEWTGVASECDSKWLGLQTWAPEDED 815
           FQAE+PEWT V SE DSKWLG + W  E E+
Sbjct: 450 FQAEVPEWTSVVSESDSKWLGTRLWPLECEN 480


>ref|XP_002276148.2| PREDICTED: AT-rich interactive domain-containing protein 1-like
           [Vitis vinifera]
          Length = 628

 Score =  147 bits (370), Expect = 4e-33
 Identities = 104/274 (37%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
 Frame = +3

Query: 12  NGHENLASTYDNDINFPDDSDLMLSAKRISDKVDEITENIKG--DYGKVHVQDDANVELS 185
           +G ENL   Y ND    D         +  D  DE+  ++K   D  +  V DD +V + 
Sbjct: 198 SGVENL---YCNDEVKSDVKVESEGGVKCVDDNDEVKSSVKLELDLNRKCVDDDEDVMIL 254

Query: 186 LASAGNDVVISRKRKWQSISISGMLNWVTQAAKHSDDPAIGIVPGPSKWNDYGTEEYWVQ 365
             +  N+ V +RKRK + +   GMLNWVT  AK+  DP+IG +P  SKW   G  E W Q
Sbjct: 255 DLNEVNEEVFTRKRKREYML--GMLNWVTTIAKNPCDPSIGKLPERSKWKLTGPGELWKQ 312

Query: 366 ALLAREALLVKRPICANLEEFSLQKKLKMHPLMYEDKNVHQSAEGARSSKRLSSSKPQFC 545
            LL REAL ++R +  + E+   QKK KMHP MYED   H  +E  R S+RL S K    
Sbjct: 313 VLLVREALFLQRDVDLSAEQSIWQKKQKMHPSMYED---HAGSERLRYSQRLLSGKRSRS 369

Query: 546 PCCNLGRTTR------KFTSPCKAETHNNLMV----PSSPMTMEELSPDASEALHFDEAL 695
             C+   ++       K  SPC  + H+  ++    PS   ++  L  D+          
Sbjct: 370 RACSESSSSATQSDLDKSPSPCMEDHHDKQLLGICDPSIGHSVAGLCGDSH--------- 420

Query: 696 IRHVSVGPSFQAEIPEWTGVASECDSKWLGLQTW 797
           +R   VGP+FQA IPEWTGV SE DSKWLG + W
Sbjct: 421 VRKRPVGPAFQATIPEWTGVVSEIDSKWLGTRVW 454


>emb|CAN80959.1| hypothetical protein VITISV_037562 [Vitis vinifera]
          Length = 724

 Score =  147 bits (370), Expect = 4e-33
 Identities = 104/274 (37%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
 Frame = +3

Query: 12  NGHENLASTYDNDINFPDDSDLMLSAKRISDKVDEITENIKG--DYGKVHVQDDANVELS 185
           +G ENL   Y ND    D         +  D  DE+  ++K   D  +  V DD +V + 
Sbjct: 198 SGVENL---YCNDEVKSDVKVESEGGVKCVDDNDEVKSSVKLELDLNRKCVDDDEDVMIL 254

Query: 186 LASAGNDVVISRKRKWQSISISGMLNWVTQAAKHSDDPAIGIVPGPSKWNDYGTEEYWVQ 365
             +  N+ V +RKRK + +   GMLNWVT  AK+  DP+IG +P  SKW   G  E W Q
Sbjct: 255 DLNEVNEEVFTRKRKREYML--GMLNWVTTIAKNPCDPSIGKLPERSKWKLTGPGELWKQ 312

Query: 366 ALLAREALLVKRPICANLEEFSLQKKLKMHPLMYEDKNVHQSAEGARSSKRLSSSKPQFC 545
            LL REAL ++R +  + E+   QKK KMHP MYED   H  +E  R S+RL S K    
Sbjct: 313 VLLVREALFLQRDVDLSAEQSIWQKKQKMHPSMYED---HAGSERLRYSQRLLSGKRSRS 369

Query: 546 PCCNLGRTTR------KFTSPCKAETHNNLMV----PSSPMTMEELSPDASEALHFDEAL 695
             C+   ++       K  SPC  + H+  ++    PS   ++  L  D+          
Sbjct: 370 RACSESSSSATQSDLDKSPSPCMEDHHDKQLLGICDPSIGHSVAGLCGDSH--------- 420

Query: 696 IRHVSVGPSFQAEIPEWTGVASECDSKWLGLQTW 797
           +R   VGP+FQA IPEWTGV SE DSKWLG + W
Sbjct: 421 VRKRPVGPAFQATIPEWTGVVSEIDSKWLGTRVW 454


>ref|XP_002509831.1| DNA binding protein, putative [Ricinus communis]
           gi|223549730|gb|EEF51218.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 656

 Score =  142 bits (357), Expect = 1e-31
 Identities = 96/229 (41%), Positives = 123/229 (53%), Gaps = 17/229 (7%)
 Frame = +3

Query: 171 NVELSLASAGNDVVI-----------SRKRKWQSISISGMLNWVTQAAKHSDDPAIGIVP 317
           N + S  + G+DVVI            RKRK +S+S   MLNWV QAAK  D P+IG +P
Sbjct: 262 NEKCSTDNDGDDVVILDPSIGEKLFSPRKRKRESLS--RMLNWVIQAAKSPDHPSIGNIP 319

Query: 318 GPSKWNDYGTEEYWVQALLAREALLVKRPICANLEEFSLQKKLKMHPLMYED--KNVHQS 491
             SK  D    E W QA+ AR+AL+ +R + +  E   LQ   K+HP MY+D       S
Sbjct: 320 PLSKCKDNKGNELWAQAIRARDALVRRRQVNSGCERSLLQNHQKIHPSMYKDAIPPSDPS 379

Query: 492 AEGARSSKRLSS-SKPQFCPCCN-LGRTTRKFTSPCKAETHNNLMVPSSPMTMEELSPDA 665
           +E  R S+RL +  KP+ C CCN       +  SP K E  N    P + + M E    A
Sbjct: 380 SERVRCSERLPALVKPRSCSCCNSCSAPKSQLISPPKTELEN---APKAKVLMAEDLSAA 436

Query: 666 SEALHF--DEALIRHVSVGPSFQAEIPEWTGVASECDSKWLGLQTWAPE 806
           +  L    D  + RHVSVG  FQAE+PEWTG+ SE +SKWLG Q W  E
Sbjct: 437 TATLSSSGDIHIHRHVSVGRRFQAEVPEWTGLVSESESKWLGTQAWPLE 485


>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  137 bits (345), Expect = 3e-30
 Identities = 96/272 (35%), Positives = 132/272 (48%), Gaps = 23/272 (8%)
 Frame = +3

Query: 63  DDSDLMLSAKRISDKVDEITE----NIKGDYGKVHVQDDANVELSLASAGNDVVI----- 215
           DD    L ++R  + VD   E    N+     +     + + E +    G+DV I     
Sbjct: 178 DDGVFELESERTDNCVDLDKEKSILNLSIVLRRAEKSPNDDDEKNCVDGGDDVAIQDPII 237

Query: 216 ------SRKRKWQSISISGMLNWVTQAAKHSDDPAIGIVPGPSKWNDYGTEEYWVQALLA 377
                 SRKRK +S S  GMLNWV + AKH ++P  G        N  G E +  Q L  
Sbjct: 238 AKKSSFSRKRKRESFS--GMLNWVREIAKHPEEPYKG--------NKNGNEVFSTQILRV 287

Query: 378 REALLVKRPICANLEEFSLQKKLKMHPLMYEDKNV--HQSAEGARSSKRLSSSKPQFCPC 551
           RE+LL++R +    E+  LQ K KMHP MYED  V  HQS E +R S+RL S K   C C
Sbjct: 288 RESLLIRRKVHTKEEQSLLQVKQKMHPSMYEDNIVVNHQSTEKSRCSRRLFSVKSHLCSC 347

Query: 552 CNLG------RTTRKFTSPCKAETHNNLMVPSSPMTMEELSPDASEALHFDEALIRHVSV 713
                       T+  + P +     N   P +  T+++L PD        +  ++ + V
Sbjct: 348 SAAQSKLPGPHRTKSESCPKEQALTPNEQEPENTNTLDDLFPD--------DLFLKPIPV 399

Query: 714 GPSFQAEIPEWTGVASECDSKWLGLQTWAPED 809
           GP+FQAE+PEWTG  +E DSKWLG Q W  E+
Sbjct: 400 GPNFQAEVPEWTGEVTESDSKWLGTQVWPLEN 431


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