BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032499
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   123   2e-26
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   117   1e-24
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   114   6e-24
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   114   6e-24
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   1e-23

>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/128 (47%), Positives = 83/128 (64%)
 Frame = +1

Query: 4   INFQKSGIMFSSNVKRDKQAEFAEILGVHNDLESSNYLGLPSLVGRSKKKVFGFLKDRVN 183
           IN QKS I FS NV   K+   + +L V   +    YLGLPS++GRSKK +F ++KDR+ 
Sbjct: 306 INMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIW 365

Query: 184 KRIQSWCSKPISRAGKSVLIRNVAQAIPAYTMLCFLLPKTLILDIERAFNGYWWQSGSDR 363
            RI    SK +S+AGK VLI++VAQAIP+Y M  FLLP ++  DIE+  N +WW   ++ 
Sbjct: 366 NRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEG 425

Query: 364 TKGVRWHS 387
             G+RW S
Sbjct: 426 RGGIRWMS 433


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/126 (42%), Positives = 81/126 (64%)
 Frame = +1

Query: 4   INFQKSGIMFSSNVKRDKQAEFAEILGVHNDLESSNYLGLPSLVGRSKKKVFGFLKDRVN 183
           IN  KS + FS N+    Q + + I+GV + + +  YLGLPS++ R K  VF F+KD + 
Sbjct: 102 INLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDRDKWSVFSFIKDSIW 161

Query: 184 KRIQSWCSKPISRAGKSVLIRNVAQAIPAYTMLCFLLPKTLILDIERAFNGYWWQSGSDR 363
           KRI  W  + +S+AGK V+I++V Q+IP+Y M  +LLP ++I DIE+  N +WW  G   
Sbjct: 162 KRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKMVNAFWW-GGRSN 220

Query: 364 TKGVRW 381
            +G++W
Sbjct: 221 NRGIKW 226


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/123 (45%), Positives = 80/123 (65%)
 Frame = +1

Query: 19  SGIMFSSNVKRDKQAEFAEILGVHNDLESSNYLGLPSLVGRSKKKVFGFLKDRVNKRIQS 198
           +GI FS N     +   + ILGV   L +  YLGL SL+G+SK+ VFGFL+DR+ +R+Q 
Sbjct: 120 NGIFFSKNASSLDRDFISNILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQG 179

Query: 199 WCSKPISRAGKSVLIRNVAQAIPAYTMLCFLLPKTLILDIERAFNGYWWQSGSDRTKGVR 378
           W SK +S+AGK +LI+ V QAIP+Y M  FLLP +L  ++++  N +WW   SD  + + 
Sbjct: 180 WQSKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRIN 239

Query: 379 WHS 387
           W S
Sbjct: 240 WLS 242


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/101 (50%), Positives = 73/101 (72%)
 Frame = +1

Query: 79  LGVHNDLESSNYLGLPSLVGRSKKKVFGFLKDRVNKRIQSWCSKPISRAGKSVLIRNVAQ 258
           LGVHN++ S  YLGLPS+VGR+K  +F +LKDR+ K+ QSW  + +SRA K VLI++VAQ
Sbjct: 270 LGVHNNIGSGKYLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQ 329

Query: 259 AIPAYTMLCFLLPKTLILDIERAFNGYWWQSGSDRTKGVRW 381
           AIP+Y M  FL+P +L  ++ER  N ++W S  +  +G+ W
Sbjct: 330 AIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINW 370


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/128 (42%), Positives = 80/128 (62%)
 Frame = +1

Query: 4    INFQKSGIMFSSNVKRDKQAEFAEILGVHNDLESSNYLGLPSLVGRSKKKVFGFLKDRVN 183
            +N  K+ ++FS +V R++++    +LGV        YLGLP+++GRSKK  F  +K+R+ 
Sbjct: 717  VNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIW 776

Query: 184  KRIQSWCSKPISRAGKSVLIRNVAQAIPAYTMLCFLLPKTLILDIERAFNGYWWQSGSDR 363
            K++Q W  K +SR GK VLI++VAQAIP Y M  F LP  LI +I      +WW S SD 
Sbjct: 777  KKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGS-SDT 835

Query: 364  TKGVRWHS 387
             + + WHS
Sbjct: 836  NRKMHWHS 843