BLASTX nr result

ID: Bupleurum21_contig00032496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032496
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   132   4e-29
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   127   9e-28
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   120   1e-25
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   119   3e-25

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/90 (71%), Positives = 80/90 (88%)
 Frame = -3

Query: 322 DKLFIDAQKLMDKITDSPDDPNPNVLHALASILETEESRYMDDTFDSSVDNVRASHTIGR 143
           D L    QKLM+KIT SPD+PNP+VLHAL+SILET+ESRYM++T  SS++N RA+H IGR
Sbjct: 169 DSLQSKVQKLMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGR 228

Query: 142 LGNLIRENDEFFELISSKFLSEARYSLSVQ 53
           LG+L+R+ND+FFELISSKFLSE+RYS+SVQ
Sbjct: 229 LGSLVRDNDDFFELISSKFLSESRYSISVQ 258


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/90 (71%), Positives = 80/90 (88%)
 Frame = -3

Query: 322 DKLFIDAQKLMDKITDSPDDPNPNVLHALASILETEESRYMDDTFDSSVDNVRASHTIGR 143
           D L    QKLM+KIT SPD+PNP+VLHAL+SILET+ESRYM++T  SS++N RA+H IGR
Sbjct: 35  DSLQSKVQKLMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGR 94

Query: 142 LGNLIRENDEFFELISSKFLSEARYSLSVQ 53
           LG+L+R+ND+FFELISSKFLSE+RYS+SVQ
Sbjct: 95  LGSLVRDNDDFFELISSKFLSESRYSISVQ 124


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/105 (61%), Positives = 78/105 (74%)
 Frame = -3

Query: 322 DKLFIDAQKLMDKITDSPDDPNPNVLHALASILETEESRYMDDTFDSSVDNVRASHTIGR 143
           ++L   AQKLMD+IT SPD+PNP VLHAL+S+LE +ES YM+    SS +N RASH IGR
Sbjct: 46  EELMDKAQKLMDRITSSPDNPNPTVLHALSSLLEAQESLYMEKNGYSSFNNSRASHNIGR 105

Query: 142 LGNLIRENDEFFELISSKFLSEARYSLSVQXXXXXXXXXXXLTWM 8
           LGNL+RENDEFF+LIS+KFLSE RYS SVQ           LTW+
Sbjct: 106 LGNLVRENDEFFDLISTKFLSETRYSTSVQAAAARLLMSCSLTWI 150


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/105 (59%), Positives = 73/105 (69%)
 Frame = -3

Query: 322 DKLFIDAQKLMDKITDSPDDPNPNVLHALASILETEESRYMDDTFDSSVDNVRASHTIGR 143
           ++L     KLM+KIT +PD+PN  VLHALASILE +ESRYM++   SS    RA+H IGR
Sbjct: 23  EELIAKVNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSSTARAAHIIGR 82

Query: 142 LGNLIRENDEFFELISSKFLSEARYSLSVQXXXXXXXXXXXLTWM 8
           LG LIRENDEFFELISSKFL E RYS S+Q           LTW+
Sbjct: 83  LGGLIRENDEFFELISSKFLLETRYSTSIQAASGRLLLCCSLTWI 127


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
           sativus]
          Length = 1915

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/104 (60%), Positives = 75/104 (72%)
 Frame = -3

Query: 322 DKLFIDAQKLMDKITDSPDDPNPNVLHALASILETEESRYMDDTFDSSVDNVRASHTIGR 143
           D+L   A KLMDK+T S D+PNP  LHALA++LET+ESRYM +   SS  N R SH+IGR
Sbjct: 49  DELIARAHKLMDKVTASYDNPNPTFLHALATLLETQESRYMAENGHSS-SNGRGSHSIGR 107

Query: 142 LGNLIRENDEFFELISSKFLSEARYSLSVQXXXXXXXXXXXLTW 11
           LGN++RENDEFFELISSKFLS+ RYS S+Q           LTW
Sbjct: 108 LGNVLRENDEFFELISSKFLSDTRYSSSIQAAAARLLLSCSLTW 151


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