BLASTX nr result
ID: Bupleurum21_contig00032467
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032467 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 gb|ABK93072.1| unknown [Populus trichocarpa] 119 3e-25 gb|ABK92865.1| unknown [Populus trichocarpa] 119 3e-25 ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [C... 102 4e-20 ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C... 101 7e-20 >ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1| predicted protein [Populus trichocarpa] Length = 168 Score = 119 bits (298), Expect = 3e-25 Identities = 52/78 (66%), Positives = 66/78 (84%) Frame = -1 Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189 YSG+VIGKK GKRKASD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V Sbjct: 85 YSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144 Query: 188 AKALHQPVTTEDLESGSV 135 A+ALH+P EDL S S+ Sbjct: 145 AEALHKPAAAEDLASASI 162 >gb|ABK93072.1| unknown [Populus trichocarpa] Length = 168 Score = 119 bits (298), Expect = 3e-25 Identities = 51/78 (65%), Positives = 67/78 (85%) Frame = -1 Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189 YSG+VIGKK +GKRK+SD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V Sbjct: 85 YSGFVIGKKSLGKRKSSDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144 Query: 188 AKALHQPVTTEDLESGSV 135 A+ALH+P EDL S S+ Sbjct: 145 AEALHKPAAAEDLASASI 162 >gb|ABK92865.1| unknown [Populus trichocarpa] Length = 168 Score = 119 bits (298), Expect = 3e-25 Identities = 52/78 (66%), Positives = 66/78 (84%) Frame = -1 Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189 YSG+VIGKK GKRKASD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V Sbjct: 85 YSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144 Query: 188 AKALHQPVTTEDLESGSV 135 A+ALH+P EDL S S+ Sbjct: 145 AEALHKPAAAEDLASASI 162 >ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus] Length = 169 Score = 102 bits (253), Expect = 4e-20 Identities = 49/77 (63%), Positives = 58/77 (75%) Frame = -1 Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189 YSGYV+GKK KAS++ + DS WQV AKF N+T WNHD+LPSQDD F R+ HWL V Sbjct: 91 YSGYVLGKKS----KASEQCD-DSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTV 145 Query: 188 AKALHQPVTTEDLESGS 138 A+ALH+PVT EDL S S Sbjct: 146 AQALHKPVTAEDLASAS 162 >ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus] Length = 164 Score = 101 bits (251), Expect = 7e-20 Identities = 50/77 (64%), Positives = 57/77 (74%) Frame = -1 Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189 YSGYV+GKK KAS K +DS WQV AKF N+T WNHD+LPSQDD F R+ HWL V Sbjct: 86 YSGYVLGKKS----KAS-KHCDDSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTV 140 Query: 188 AKALHQPVTTEDLESGS 138 A+ALH+PVT EDL S S Sbjct: 141 AQALHKPVTAEDLASAS 157