BLASTX nr result

ID: Bupleurum21_contig00032467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032467
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
gb|ABK93072.1| unknown [Populus trichocarpa]                          119   3e-25
gb|ABK92865.1| unknown [Populus trichocarpa]                          119   3e-25
ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [C...   102   4e-20
ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [C...   101   7e-20

>ref|XP_002332136.1| predicted protein [Populus trichocarpa] gi|222875186|gb|EEF12317.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/78 (66%), Positives = 66/78 (84%)
 Frame = -1

Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189
           YSG+VIGKK  GKRKASD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V
Sbjct: 85  YSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144

Query: 188 AKALHQPVTTEDLESGSV 135
           A+ALH+P   EDL S S+
Sbjct: 145 AEALHKPAAAEDLASASI 162


>gb|ABK93072.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  119 bits (298), Expect = 3e-25
 Identities = 51/78 (65%), Positives = 67/78 (85%)
 Frame = -1

Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189
           YSG+VIGKK +GKRK+SD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V
Sbjct: 85  YSGFVIGKKSLGKRKSSDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144

Query: 188 AKALHQPVTTEDLESGSV 135
           A+ALH+P   EDL S S+
Sbjct: 145 AEALHKPAAAEDLASASI 162


>gb|ABK92865.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/78 (66%), Positives = 66/78 (84%)
 Frame = -1

Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189
           YSG+VIGKK  GKRKASD SE++S +W++ AKF+N+T WNHDSLPS+ DAF+RSLHWL+V
Sbjct: 85  YSGFVIGKKSPGKRKASDMSEQNSNTWEITAKFENITYWNHDSLPSKVDAFVRSLHWLSV 144

Query: 188 AKALHQPVTTEDLESGSV 135
           A+ALH+P   EDL S S+
Sbjct: 145 AEALHKPAAAEDLASASI 162


>ref|XP_004145482.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 169

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/77 (63%), Positives = 58/77 (75%)
 Frame = -1

Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189
           YSGYV+GKK     KAS++ + DS  WQV AKF N+T WNHD+LPSQDD F R+ HWL V
Sbjct: 91  YSGYVLGKKS----KASEQCD-DSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTV 145

Query: 188 AKALHQPVTTEDLESGS 138
           A+ALH+PVT EDL S S
Sbjct: 146 AQALHKPVTAEDLASAS 162


>ref|XP_004172201.1| PREDICTED: ribonuclease H2 subunit C-like [Cucumis sativus]
          Length = 164

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/77 (64%), Positives = 57/77 (74%)
 Frame = -1

Query: 368 YSGYVIGKKKVGKRKASDKSEEDSGSWQVNAKFQNVTSWNHDSLPSQDDAFLRSLHWLAV 189
           YSGYV+GKK     KAS K  +DS  WQV AKF N+T WNHD+LPSQDD F R+ HWL V
Sbjct: 86  YSGYVLGKKS----KAS-KHCDDSSPWQVKAKFDNITYWNHDTLPSQDDTFQRTFHWLTV 140

Query: 188 AKALHQPVTTEDLESGS 138
           A+ALH+PVT EDL S S
Sbjct: 141 AQALHKPVTAEDLASAS 157


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