BLASTX nr result

ID: Bupleurum21_contig00032464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032464
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   120   1e-25
emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]   120   1e-25
emb|CAN80084.1| hypothetical protein VITISV_011294 [Vitis vinifera]   120   1e-25
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]   120   1e-25
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]   120   1e-25

>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/127 (48%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
 Frame = -3

Query: 365  YLEDYVC---VAGSDHWCNLV---ETLSSSMQVLINKTSQVTEPVDYLEASQDIAWVEAM 204
            YL+DY C    + +DH  + V    +LS    + IN  +++ EP  Y +A Q   W +AM
Sbjct: 872  YLKDYHCNSVTSSTDHPISEVLSYSSLSDPYMIFINAVNKIPEPHTYAQARQIKEWCDAM 931

Query: 203  QKEIEALTNNDTWDLVALPKEKKPIGCKWVYKVKLKSDGSVERLKARLVAKGFTQQYGID 24
              EI AL +N TW + +LP  KK +GCKWVYK+KL +DGS+ER KARLVAKG+TQ  G+D
Sbjct: 932  GMEITALEDNGTWVVCSLPVGKKAVGCKWVYKIKLNADGSLERYKARLVAKGYTQTEGLD 991

Query: 23   YLEIFSP 3
            Y++ FSP
Sbjct: 992  YVDTFSP 998


>emb|CAN80320.1| hypothetical protein VITISV_034560 [Vitis vinifera]
          Length = 1261

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257  EPVDYLEASQDIAWVEAMQKEIEALTNNDTWDLVALPKEKKPIGCKWVYKVKLKSDGSVE 78
            EP  Y EAS D  W  AM++E++ALT N TWDLV LP  +  +GCKW+YK+K +SDGSVE
Sbjct: 784  EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVE 843

Query: 77   RLKARLVAKGFTQQYGIDYLEIFSP 3
            R KARLVAKGFTQ+YGIDY E F+P
Sbjct: 844  RYKARLVAKGFTQEYGIDYEETFAP 868


>emb|CAN80084.1| hypothetical protein VITISV_011294 [Vitis vinifera]
          Length = 180

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 EPVDYLEASQDIAWVEAMQKEIEALTNNDTWDLVALPKEKKPIGCKWVYKVKLKSDGSVE 78
           EP  Y EAS D  W  AM++E++ALT N TWDLV LP  +  +GCKW+YK+K +SDGSVE
Sbjct: 59  EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVE 118

Query: 77  RLKARLVAKGFTQQYGIDYLEIFSP 3
           R KARLVAKGFTQ+YGIDY E F+P
Sbjct: 119 RYKARLVAKGFTQEYGIDYEETFAP 143


>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
          Length = 1381

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257  EPVDYLEASQDIAWVEAMQKEIEALTNNDTWDLVALPKEKKPIGCKWVYKVKLKSDGSVE 78
            EP  Y EAS D  W  AM++E++ALT N TWDLV LP  +  +GCKW+YK+K +SDGSVE
Sbjct: 874  EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVE 933

Query: 77   RLKARLVAKGFTQQYGIDYLEIFSP 3
            R KARLVAKGFTQ+YGIDY E F+P
Sbjct: 934  RYKARLVAKGFTQEYGIDYEETFAP 958


>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
          Length = 1271

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257  EPVDYLEASQDIAWVEAMQKEIEALTNNDTWDLVALPKEKKPIGCKWVYKVKLKSDGSVE 78
            EP  Y EAS D  W  AM++E++ALT N TWDLV LP  +  +GCKW+YK+K +SDGSVE
Sbjct: 808  EPQTYREASTDPLWQIAMKEELDALTKNHTWDLVTLPPGQSVVGCKWIYKIKTRSDGSVE 867

Query: 77   RLKARLVAKGFTQQYGIDYLEIFSP 3
            R KARLVAKGFTQ+YGIDY E F+P
Sbjct: 868  RYKARLVAKGFTQEYGIDYEETFAP 892


Top