BLASTX nr result

ID: Bupleurum21_contig00032452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032452
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3    FTCRFTQQVLRYFQMKGWCNLNHSS--WMEFIRKAADTWKGKAAWDVVNKILLGALVYII 176
            F C +T+ +  ++ +   C++   +  W E+IR A  +W GK+  +   K+   A VY +
Sbjct: 1272 FECSYTKAI--WWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHV 1329

Query: 177  WQERNLRLFQGAHRACQQVIKEIEDTVRLKM 269
            WQERN R+F G  R    V+ +IE  +R K+
Sbjct: 1330 WQERNARIFAGMSRTPNLVLNQIECIIRDKL 1360


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3    FTCRFTQQVLRYFQMKGWCNLNHSS--WMEFIRKAADTWKGKAAWDVVNKILLGALVYII 176
            F C +T+ +  ++ +   C++   +  W E+IR A  +W GK+  +   K+   A VY +
Sbjct: 932  FECSYTKAI--WWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHV 989

Query: 177  WQERNLRLFQGAHRACQQVIKEIEDTVRLKM 269
            WQERN R+F G  R    V  +IE  +R K+
Sbjct: 990  WQERNARIFAGLSRTSNLVFNQIECIIRDKL 1020


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   FTCRFTQQVLRYFQMKGWCNLNHSS--WMEFIRKAADTWKGKAAWDVVNKILLGALVYII 176
           F C +T+ +  ++ +   C++   +  W E+IR A  +W GK+  +   K+   A VY +
Sbjct: 217 FECSYTKAI--WWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHV 274

Query: 177 WQERNLRLFQGAHRACQQVIKEIEDTVRLKM 269
           WQERN R+F G  R    V  +IE  +R K+
Sbjct: 275 WQERNARIFAGLSRTSNLVFNQIECIIRDKL 305


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