BLASTX nr result

ID: Bupleurum21_contig00032449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032449
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   100   9e-20
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   2e-19
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]    99   5e-19
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    98   6e-19
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    97   1e-18

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/98 (46%), Positives = 62/98 (63%)
 Frame = +2

Query: 2   GGLGFRSLWGFNISLLGKQCWKLINQPHSLVARVYKAKYYPNCHFLKSIKGSASSFIWNG 181
           GG+GFR L  FN +LL KQCW+L+ +P SLVARV+KA+Y+P   FL ++ GS  SF W  
Sbjct: 100 GGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRS 159

Query: 182 LHTAKDTLLSGFRWVVGNGTNIMATKDPWLRSKSDFCV 295
           +  ++  L +G RW VGNG +I    D W+     F V
Sbjct: 160 IVGSRSLLNAGLRWRVGNGASISVKYDKWVPRPHSFKV 197


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/90 (48%), Positives = 62/90 (68%)
 Frame = +2

Query: 2    GGLGFRSLWGFNISLLGKQCWKLINQPHSLVARVYKAKYYPNCHFLKSIKGSASSFIWNG 181
            GG+GFR L  FN +LLG+Q W+L+ +PHSL+ARV KAKYY N  FL +  G ++S+ W  
Sbjct: 855  GGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRS 914

Query: 182  LHTAKDTLLSGFRWVVGNGTNIMATKDPWL 271
            + ++K  L  G  W +GNGTN+   +DPW+
Sbjct: 915  IWSSKALLKEGMVWRIGNGTNVRIWEDPWV 944


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   GGLGFRSLWGFNISLLGKQCWKLINQPHSLVARVYKAKYYPNCHFLKSIKGSASSFIWNG 181
           GGLGFR+   FN+++LGKQ W LI +P SL+AR+ KA+YY +  FL +  G   SF W G
Sbjct: 372 GGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFLSARLGHNPSFTWKG 431

Query: 182 LHTAKDTLLSGFRWVVGNGTNIMATKDPWLRSKSDFCVE 298
           + +++  LL G RW +G+G +I    +PWLR   +F VE
Sbjct: 432 IWSSRAILLKGSRWRIGDGCSIDVWNNPWLRDAENFKVE 470


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/98 (46%), Positives = 61/98 (62%)
 Frame = +2

Query: 2   GGLGFRSLWGFNISLLGKQCWKLINQPHSLVARVYKAKYYPNCHFLKSIKGSASSFIWNG 181
           GG+GFR L  FN +LL KQCW+L  +P SLVARV+KA+Y+P   FL ++ GS  SF W  
Sbjct: 100 GGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQTSFLDALVGSNPSFTWRS 159

Query: 182 LHTAKDTLLSGFRWVVGNGTNIMATKDPWLRSKSDFCV 295
           +  ++  L +G RW VGNG +I    D W+     F V
Sbjct: 160 IVGSRRLLNAGLRWRVGNGASISVKYDKWVPRPHSFKV 197


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/90 (47%), Positives = 60/90 (66%)
 Frame = +2

Query: 2    GGLGFRSLWGFNISLLGKQCWKLINQPHSLVARVYKAKYYPNCHFLKSIKGSASSFIWNG 181
            GG+GF+ L  FN +LLG+Q W+L  +P SL+ RV KAKY+PNC FL +  G +SS+ W+ 
Sbjct: 855  GGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPLGHSSSYSWSS 914

Query: 182  LHTAKDTLLSGFRWVVGNGTNIMATKDPWL 271
            + ++K  L  G  W VGNG+ I    DPW+
Sbjct: 915  IWSSKALLKEGVIWRVGNGSQINMWSDPWV 944


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