BLASTX nr result

ID: Bupleurum21_contig00032448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032448
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera...   243   5e-62
ref|XP_003560639.1| PREDICTED: protein vip1-like [Brachypodium d...   229   7e-58
ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativu...   228   1e-57
ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group] g...   226   4e-57
gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indi...   226   4e-57

>ref|XP_002281499.2| PREDICTED: protein vip1-like [Vitis vinifera]
           gi|297737602|emb|CBI26803.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  243 bits (619), Expect = 5e-62
 Identities = 132/228 (57%), Positives = 169/228 (74%)
 Frame = -3

Query: 832 AMLMLGATVVDRPILITPVENYQLPPYAPPLTLEKKSTANDSAVYKTEDVVSTMLALGFI 653
           A+L+ GAT+ D  + ITPV+NYQLPP A P + E+K    +SAV K EDVVSTMLA GF+
Sbjct: 86  AVLLTGATIADLSVSITPVDNYQLPPGALPPSPEEKLHTTNSAVKKGEDVVSTMLAKGFV 145

Query: 652 LGKDTLSRAKAFDEKLQLTSNASATIASINRKFGLIKMLSSGKAAVNGKVREIDDWFQVS 473
           LGKD +++AKAFDE+  L SNASAT+ASI+RK GL + LS G A VN KV+E+D+ +QV 
Sbjct: 146 LGKDAINKAKAFDEQHHLVSNASATVASIDRKMGLSEKLSIGTAVVNEKVKEMDERYQVF 205

Query: 472 GMTKQAVLAAEHTASSAGSAIMGNRYISTGASWVSSALTMFTKAAEDVSSMTRNKVEKAE 293
             TK A+  AE  AS AGSAIM N Y++TGASWVSSAL+M TKAAEDVS MTR KV +AE
Sbjct: 206 EKTKSALAIAEQKASIAGSAIMNNHYVATGASWVSSALSMVTKAAEDVSVMTREKVGRAE 265

Query: 292 KEKQEILYKERQTVVDDYARFHLDKSSTAELTVVSVHTNI*YAKLGNI 149
           +EK+EI+Y+E+   V++YA+ HLD+S   E  +V V  ++   KLG I
Sbjct: 266 EEKKEIIYREKMGFVNEYAQIHLDESPAGEPPIVPV-DSVDDCKLGMI 312


>ref|XP_003560639.1| PREDICTED: protein vip1-like [Brachypodium distachyon]
          Length = 284

 Score =  229 bits (583), Expect = 7e-58
 Identities = 112/218 (51%), Positives = 168/218 (77%)
 Frame = -3

Query: 832 AMLMLGATVVDRPILITPVENYQLPPYAPPLTLEKKSTANDSAVYKTEDVVSTMLALGFI 653
           A+L+ GAT+VDR ++ITPVENYQLPP A      +KS + +SAV K EDVVS+M+A GF+
Sbjct: 58  AVLLSGATIVDRSVIITPVENYQLPPEACKQLSGEKSLSTESAVRKAEDVVSSMIAKGFV 117

Query: 652 LGKDTLSRAKAFDEKLQLTSNASATIASINRKFGLIKMLSSGKAAVNGKVREIDDWFQVS 473
           L KD L+ A++FDE+  + SNA+AT+AS++R++GL + ++ G+A V  K +E+D+ +QVS
Sbjct: 118 LSKDALNLARSFDERHNILSNATATVASLDRQYGLSEKITLGRAVVGSKCKEVDERYQVS 177

Query: 472 GMTKQAVLAAEHTASSAGSAIMGNRYISTGASWVSSALTMFTKAAEDVSSMTRNKVEKAE 293
            +TK A+  AE  AS AGSAIMGN+Y+S GASW++SA  M TKAA D+S+MT++KV++AE
Sbjct: 178 ELTKSALAVAEQKASIAGSAIMGNQYVSAGASWLTSAFGMVTKAAGDMSTMTKDKVDRAE 237

Query: 292 KEKQEILYKERQTVVDDYARFHLDKSSTAELTVVSVHT 179
           +E++EI+++ER  +V +YA+ HLD+ S+ E  V+ + +
Sbjct: 238 EERKEIMWEERNGLVSEYAKIHLDEHSSWEPAVLPLES 275


>ref|XP_004142266.1| PREDICTED: protein vip1-like [Cucumis sativus]
           gi|449523840|ref|XP_004168931.1| PREDICTED: protein
           vip1-like [Cucumis sativus]
          Length = 278

 Score =  228 bits (581), Expect = 1e-57
 Identities = 117/218 (53%), Positives = 159/218 (72%)
 Frame = -3

Query: 832 AMLMLGATVVDRPILITPVENYQLPPYAPPLTLEKKSTANDSAVYKTEDVVSTMLALGFI 653
           A+L+ GA + D  + IT VENY LPP A    L+K+ T    A  + EDVVSTMLA GFI
Sbjct: 58  AILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVTGIAPNQAEDVVSTMLAKGFI 117

Query: 652 LGKDTLSRAKAFDEKLQLTSNASATIASINRKFGLIKMLSSGKAAVNGKVREIDDWFQVS 473
           LGKD L++AKAFDE+LQLTSNASAT+ASI+RK G+ + +++G A VN KVRE+D+ FQV 
Sbjct: 118 LGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVR 177

Query: 472 GMTKQAVLAAEHTASSAGSAIMGNRYISTGASWVSSALTMFTKAAEDVSSMTRNKVEKAE 293
             TK A+  AE  A+SAG+A+M N Y+ TGA+W S+A+T  TKAAE+V+ MT+ KVEKAE
Sbjct: 178 EKTKSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAE 237

Query: 292 KEKQEILYKERQTVVDDYARFHLDKSSTAELTVVSVHT 179
           +EK+E +Y+ER  ++ ++A  HLD+    E  +V V++
Sbjct: 238 EEKKESIYRERTGIISNFAELHLDEPLPGEPAIVPVNS 275


>ref|NP_001051073.1| Os03g0713600 [Oryza sativa Japonica Group]
           gi|18071362|gb|AAL58221.1|AC090882_24 putative splicing
           regulatory protein [Oryza sativa Japonica Group]
           gi|108710741|gb|ABF98536.1| RRM-containing protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549544|dbj|BAF12987.1| Os03g0713600 [Oryza sativa
           Japonica Group]
          Length = 284

 Score =  226 bits (577), Expect = 4e-57
 Identities = 113/218 (51%), Positives = 167/218 (76%)
 Frame = -3

Query: 832 AMLMLGATVVDRPILITPVENYQLPPYAPPLTLEKKSTANDSAVYKTEDVVSTMLALGFI 653
           A+L+ GAT+VDR ++ITPV NYQLPP A   +  +KS++ +S V K EDVVS+MLA GF+
Sbjct: 58  AVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFV 117

Query: 652 LGKDTLSRAKAFDEKLQLTSNASATIASINRKFGLIKMLSSGKAAVNGKVREIDDWFQVS 473
           L KD L+ A++FDE+  + SNA+AT+AS++R++G+ + +S G+A V  KV+E+DD +QVS
Sbjct: 118 LSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVS 177

Query: 472 GMTKQAVLAAEHTASSAGSAIMGNRYISTGASWVSSALTMFTKAAEDVSSMTRNKVEKAE 293
            +TK A+ AAE  AS A SAIM N+Y+S GASW++SA  M TKAA D+SSMT++KV++AE
Sbjct: 178 ELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAE 237

Query: 292 KEKQEILYKERQTVVDDYARFHLDKSSTAELTVVSVHT 179
           +E++ I+++ER  +V DYA+ HLD+ S+ E  V+ + +
Sbjct: 238 EERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLES 275


>gb|EAY91637.1| hypothetical protein OsI_13273 [Oryza sativa Indica Group]
           gi|125587696|gb|EAZ28360.1| hypothetical protein
           OsJ_12338 [Oryza sativa Japonica Group]
          Length = 305

 Score =  226 bits (577), Expect = 4e-57
 Identities = 113/218 (51%), Positives = 167/218 (76%)
 Frame = -3

Query: 832 AMLMLGATVVDRPILITPVENYQLPPYAPPLTLEKKSTANDSAVYKTEDVVSTMLALGFI 653
           A+L+ GAT+VDR ++ITPV NYQLPP A   +  +KS++ +S V K EDVVS+MLA GF+
Sbjct: 79  AVLLSGATIVDRSVIITPVVNYQLPPDARKQSAGEKSSSAESVVRKAEDVVSSMLAKGFV 138

Query: 652 LGKDTLSRAKAFDEKLQLTSNASATIASINRKFGLIKMLSSGKAAVNGKVREIDDWFQVS 473
           L KD L+ A++FDE+  + SNA+AT+AS++R++G+ + +S G+A V  KV+E+DD +QVS
Sbjct: 139 LSKDALNVARSFDERHNILSNATATVASLDRQYGVSEKISLGRAIVGSKVKEVDDRYQVS 198

Query: 472 GMTKQAVLAAEHTASSAGSAIMGNRYISTGASWVSSALTMFTKAAEDVSSMTRNKVEKAE 293
            +TK A+ AAE  AS A SAIM N+Y+S GASW++SA  M TKAA D+SSMT++KV++AE
Sbjct: 199 ELTKSALAAAEQKASIASSAIMNNQYVSAGASWLTSAFGMVTKAAGDMSSMTKDKVDRAE 258

Query: 292 KEKQEILYKERQTVVDDYARFHLDKSSTAELTVVSVHT 179
           +E++ I+++ER  +V DYA+ HLD+ S+ E  V+ + +
Sbjct: 259 EERKAIMWEERNGLVSDYAKIHLDEPSSWEPAVLPLES 296


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