BLASTX nr result

ID: Bupleurum21_contig00032437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032437
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632781.1| PREDICTED: LOW QUALITY PROTEIN: AP2-like eth...   162   3e-38
ref|XP_002521332.1| DNA binding protein, putative [Ricinus commu...   159   3e-37
dbj|BAD16602.1| AINTEGUMENTA-like protein [Pinus thunbergii]          157   1e-36
ref|XP_002304138.1| AP2 domain-containing transcription factor [...   150   1e-34
emb|CBI35877.3| unnamed protein product [Vitis vinifera]              149   2e-34

>ref|XP_003632781.1| PREDICTED: LOW QUALITY PROTEIN: AP2-like ethylene-responsive
           transcription factor AIL1-like [Vitis vinifera]
          Length = 561

 Score =  162 bits (409), Expect = 3e-38
 Identities = 90/157 (57%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
 Frame = -1

Query: 455 PQTNSSVDVNTFQTSPYVPSSTSLSGFKSWLRQTPCQ----KSDINNNEGNNV--EALAL 294
           P  N+S         P+  S+TS+SGFKSWLRQTP       S  + ++ NN   ++L+L
Sbjct: 125 PSHNNSDSAAVCYHVPFDHSATSVSGFKSWLRQTPFSGEKSSSSASADQPNNCNFQSLSL 184

Query: 293 TMKLSSPRSGFTVSPCSEIVAVAPDQTRKRVGKSSNREVVPRKSVDTFGQRTSQYRGVTR 114
           TM  SS   G T    S  +  A ++ R+  GK+  RE VPRKS+DTFGQRTSQYRGVTR
Sbjct: 185 TMSPSSQHGGVTA--VSSPLQAAENRKRQVGGKALTREPVPRKSIDTFGQRTSQYRGVTR 242

Query: 113 HRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE 3
           HRWTGRYEAHLWDNSCRKEGQTRKGRQ   GGYDKEE
Sbjct: 243 HRWTGRYEAHLWDNSCRKEGQTRKGRQ---GGYDKEE 276


>ref|XP_002521332.1| DNA binding protein, putative [Ricinus communis]
           gi|223539410|gb|EEF41000.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 613

 Score =  159 bits (401), Expect = 3e-37
 Identities = 87/134 (64%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
 Frame = -1

Query: 398 SSTSLSGFKSWLRQTPCQKSDINNNEGNNV--EALALTMKLSSPRSGFTVSPCSEIVAVA 225
           S++S+SGFKSWLRQT    SD ++NE NN   + L+LTM  SS      VSP   +    
Sbjct: 203 SASSVSGFKSWLRQTQFS-SDKSSNEVNNYNFQPLSLTMSPSSQNGMVAVSPLQVV---- 257

Query: 224 PDQTRKRVGKSSNREVVPRKSVDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTR 45
            D  ++ V KS  RE VPRKS+DTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTR
Sbjct: 258 -DNRKRPVAKSLAREPVPRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTR 316

Query: 44  KGRQVYLGGYDKEE 3
           KGRQ   GGYDKEE
Sbjct: 317 KGRQ---GGYDKEE 327


>dbj|BAD16602.1| AINTEGUMENTA-like protein [Pinus thunbergii]
          Length = 606

 Score =  157 bits (396), Expect = 1e-36
 Identities = 85/167 (50%), Positives = 103/167 (61%), Gaps = 16/167 (9%)
 Frame = -1

Query: 455 PQTNSSVDVNTFQTSPYVPSSTSLSGFKSWLRQTPCQ---------------KSDINNNE 321
           P +N ++  +     P       LS  K+WLRQ P                 KS++    
Sbjct: 50  PNSNDTMFADCSLQLPPGSGMVGLSALKTWLRQNPSNADHHKVVPSGSGSPGKSNLGGGL 109

Query: 320 GNNVEALALTMKLSSPRSGFTVSPCSEIVAVAPDQTRKR-VGKSSNREVVPRKSVDTFGQ 144
           G+  ++L L+M   S  S   +S  + I    P +T+KR  GK+  +E VPRKS+DTFGQ
Sbjct: 110 GD-FQSLTLSMSPGSQNSSAIISQPTIIDQCTPVETKKRGAGKAGTKEPVPRKSIDTFGQ 168

Query: 143 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE 3
           RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE
Sbjct: 169 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE 215


>ref|XP_002304138.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841570|gb|EEE79117.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 564

 Score =  150 bits (378), Expect = 1e-34
 Identities = 83/135 (61%), Positives = 95/135 (70%), Gaps = 3/135 (2%)
 Frame = -1

Query: 398 SSTSLSGFKSWLRQT-PCQKSDINNNEGNN--VEALALTMKLSSPRSGFTVSPCSEIVAV 228
           S++S+SGFKSWLRQT P   S  +  E NN   ++L LTM  SS     T+SP   +   
Sbjct: 181 SASSVSGFKSWLRQTAPFSSSGKSPIEANNSNFQSLLLTMSPSSQNGLATISPLQVV--- 237

Query: 227 APDQTRKRVGKSSNREVVPRKSVDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQT 48
             D  ++ V KS  +E V  KS+DTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQT
Sbjct: 238 --DNRKRPVVKSLAKEPVSHKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQT 295

Query: 47  RKGRQVYLGGYDKEE 3
           RKGRQ   GGYDKEE
Sbjct: 296 RKGRQ---GGYDKEE 307


>emb|CBI35877.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  149 bits (377), Expect = 2e-34
 Identities = 84/155 (54%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
 Frame = -1

Query: 449 TNSSVDVNTFQTSPYVPSSTSLSGFKSWLRQTPCQ----KSDINNNEGNNV--EALALTM 288
           +N S   N F   P+  S+TS+SGFKSWLRQTP       S  + ++ NN   ++L+LTM
Sbjct: 138 SNPSGHNNCFYHVPFDHSATSVSGFKSWLRQTPFSGEKSSSSASADQPNNCNFQSLSLTM 197

Query: 287 KLSSPRSGFTVSPCSEIVAVAPDQTRKRVGKSSNREVVPRKSVDTFGQRTSQYRGVTRHR 108
           K                                    VPRKS+DTFGQRTSQYRGVTRHR
Sbjct: 198 K-----------------------------------PVPRKSIDTFGQRTSQYRGVTRHR 222

Query: 107 WTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE 3
           WTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE
Sbjct: 223 WTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEE 257


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