BLASTX nr result

ID: Bupleurum21_contig00032433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032433
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37682.3| unnamed protein product [Vitis vinifera]              187   1e-45
emb|CBI17459.3| unnamed protein product [Vitis vinifera]              183   2e-44
ref|XP_002268900.1| PREDICTED: uncharacterized protein LOC100250...   183   2e-44
ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245...   181   9e-44
ref|XP_004169148.1| PREDICTED: uncharacterized LOC101214906, par...   171   9e-41

>emb|CBI37682.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  187 bits (476), Expect = 1e-45
 Identities = 104/213 (48%), Positives = 140/213 (65%), Gaps = 12/213 (5%)
 Frame = +2

Query: 2   VLGNKYQSKFLEIIDENQLPEMMGGTCTCADKGGCMVSDKGPWNDPEIMKLVRSGAHKCS 181
           VLGNKYQSK LE+ID ++LPE +GGTCTCADKGGCM SDKGPWNDPEI+K+ ++   K  
Sbjct: 226 VLGNKYQSKLLEVIDASELPEFLGGTCTCADKGGCMRSDKGPWNDPEILKMAQNYDAKSF 285

Query: 182 SKAAMPSIDEKTVSEDDQSASK------SVSFKMGKRTSMNS---KDQSEQPQLSPVKEE 334
            K  +P IDE TVS ++ +  K       +SF  G + S +S   K+  E   LSPV+EE
Sbjct: 286 KKILIPVIDENTVSGEEMAHKKCDSFDSDISFDSGDKWSHSSRLAKEHVEHQPLSPVQEE 345

Query: 335 VTHSKPTNLNKRRSSIRDRKDQMVDKKVDSGWHK-VRNNDKLALSKDLYSLH-DHGKPDG 508
           V+  K  N         +   Q+VDK VD+ W K V NN + ALS+D +  H D  +P G
Sbjct: 346 VSFLKYPNTKDYGGYEYEGFIQVVDKAVDATWPKAVNNNPQFALSRDCFPTHGDPCRPQG 405

Query: 509 -LSNHIFTGMMTFVMGIVTMVRLTRNMPKKGID 604
            +++ IF+G+M+FV+GI+TM+RLT+NMPK+  D
Sbjct: 406 RVTDQIFSGLMSFVVGIITMIRLTKNMPKRLTD 438


>emb|CBI17459.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  183 bits (465), Expect = 2e-44
 Identities = 103/207 (49%), Positives = 135/207 (65%), Gaps = 6/207 (2%)
 Frame = +2

Query: 2   VLGNKYQSKFLEIIDENQLPEMMGGTCTCADKGGCMVSDKGPWNDPEIMKLVRSGAHKCS 181
           VLGNK+QSK LEII+ ++LPE +GGTCTCAD+GGCM SDKGPW DPEI+++V++G   C 
Sbjct: 272 VLGNKFQSKLLEIIEASELPEFLGGTCTCADQGGCMRSDKGPWKDPEILRMVQNGYAICR 331

Query: 182 SKAAMPSIDEKTVSEDDQSASKSVSFKMGKRTSMN---SKDQSEQPQLSPVKEEVTHSKP 352
           +K    S  EKT+SED+    K VS ++    S++    +   E P LSPV EEV     
Sbjct: 332 TKCESQSTAEKTISEDEIVYPK-VSREVEDIQSLSPEVPRSYIEHPNLSPVHEEVR---- 386

Query: 353 TNLNKRRSSIRDRKDQMVDKKVDSGWHKVRNNDKLALSK--DLYSLHDHGK-PDGLSNHI 523
            N N  +S   +    ++DK +++ W  V  ND+ ALSK  D +++HD  K PDG S  I
Sbjct: 387 INQNFHKSYNYEDFIPIIDKSMNAPWQNVMENDRYALSKAADCFTIHDAYKAPDGFSTQI 446

Query: 524 FTGMMTFVMGIVTMVRLTRNMPKKGID 604
           FTG+M  VMGIVTM+RLTR MPKK  D
Sbjct: 447 FTGVMALVMGIVTMIRLTRTMPKKFTD 473


>ref|XP_002268900.1| PREDICTED: uncharacterized protein LOC100250656 [Vitis vinifera]
          Length = 609

 Score =  183 bits (465), Expect = 2e-44
 Identities = 103/207 (49%), Positives = 135/207 (65%), Gaps = 6/207 (2%)
 Frame = +2

Query: 2   VLGNKYQSKFLEIIDENQLPEMMGGTCTCADKGGCMVSDKGPWNDPEIMKLVRSGAHKCS 181
           VLGNK+QSK LEII+ ++LPE +GGTCTCAD+GGCM SDKGPW DPEI+++V++G   C 
Sbjct: 272 VLGNKFQSKLLEIIEASELPEFLGGTCTCADQGGCMRSDKGPWKDPEILRMVQNGYAICR 331

Query: 182 SKAAMPSIDEKTVSEDDQSASKSVSFKMGKRTSMN---SKDQSEQPQLSPVKEEVTHSKP 352
           +K    S  EKT+SED+    K VS ++    S++    +   E P LSPV EEV     
Sbjct: 332 TKCESQSTAEKTISEDEIVYPK-VSREVEDIQSLSPEVPRSYIEHPNLSPVHEEVR---- 386

Query: 353 TNLNKRRSSIRDRKDQMVDKKVDSGWHKVRNNDKLALSK--DLYSLHDHGK-PDGLSNHI 523
            N N  +S   +    ++DK +++ W  V  ND+ ALSK  D +++HD  K PDG S  I
Sbjct: 387 INQNFHKSYNYEDFIPIIDKSMNAPWQNVMENDRYALSKAADCFTIHDAYKAPDGFSTQI 446

Query: 524 FTGMMTFVMGIVTMVRLTRNMPKKGID 604
           FTG+M  VMGIVTM+RLTR MPKK  D
Sbjct: 447 FTGVMALVMGIVTMIRLTRTMPKKFTD 473


>ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245225, partial [Vitis
           vinifera]
          Length = 619

 Score =  181 bits (459), Expect = 9e-44
 Identities = 103/213 (48%), Positives = 138/213 (64%), Gaps = 12/213 (5%)
 Frame = +2

Query: 2   VLGNKYQSKFLEIIDENQLPEMMGGTCTCADKGGCMVSDKGPWNDPEIMKLVRSGAHKCS 181
           VLGNKYQSK LE+ID ++LPE +GGTCTCADKGGCM SDKGPWNDPEI+K+ ++   K  
Sbjct: 273 VLGNKYQSKLLEVIDASELPEFLGGTCTCADKGGCMRSDKGPWNDPEILKMAQNYDAKSF 332

Query: 182 SKAAMPSIDEKTVSEDDQSASK------SVSFKMGKRTSMNS---KDQSEQPQLSPVKEE 334
            K  +P IDE TVS ++ +  K       +SF  G + S +S   K+  E   LSPV+EE
Sbjct: 333 KKILIPVIDENTVSGEEMAHKKCDSFDSDISFDSGDKWSHSSRLAKEHVEHQPLSPVQEE 392

Query: 335 VTHSKPTNLNKRRSSIRDRKDQMVDKKVDSGWHK-VRNNDKLALSKDLYSLH-DHGKPDG 508
               K  N         +   Q+VDK VD+ W K V NN + ALS+D +  H D  +P G
Sbjct: 393 ----KYPNTKDYGGYEYEGFIQVVDKAVDATWPKAVNNNPQFALSRDCFPTHGDPCRPQG 448

Query: 509 -LSNHIFTGMMTFVMGIVTMVRLTRNMPKKGID 604
            +++ IF+G+M+FV+GI+TM+RLT+NMPK+  D
Sbjct: 449 RVTDQIFSGLMSFVVGIITMIRLTKNMPKRLTD 481


>ref|XP_004169148.1| PREDICTED: uncharacterized LOC101214906, partial [Cucumis sativus]
          Length = 572

 Score =  171 bits (433), Expect = 9e-41
 Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 11/209 (5%)
 Frame = +2

Query: 2   VLGNKYQSKFLEIIDENQLPEMMGGTCTCADKGGCMVSDKGPWNDPEIMKLVRSGAHKCS 181
           VLGNKYQSK LEIID ++LPE +GG+CTCAD+GGCM SDKGPW DPEI+K+V++G  +C 
Sbjct: 285 VLGNKYQSKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWKDPEIVKMVQNGEGRC- 343

Query: 182 SKAAMPSIDEKTVSEDDQSAS--KSVSFK--------MGKRTSMNSKDQSEQPQLSPVKE 331
            + ++ +++E+T+SEDD + S  +S SF              +  S    +Q +L+PV E
Sbjct: 344 RRRSLSNVEERTISEDDNTTSTKRSGSFNSEAAPDATAAAAAATESCMSPKQAKLTPVLE 403

Query: 332 EVTHSKPTNLNKRRSSIRDRKDQMVDKKVDSGWHKVRNNDKLALSKDLYSLHDHGK-PDG 508
           E+  S+     + +    ++   +VDK VDS W    + +K   SKD +++H++ K P+G
Sbjct: 404 EIRMSQKLGGCEYQ---YEKFIPVVDKAVDSNW--ALSTEKYTFSKDPFAVHENYKVPEG 458

Query: 509 LSNHIFTGMMTFVMGIVTMVRLTRNMPKK 595
            SN I  G+M  VMGIVTMVRLTR MPKK
Sbjct: 459 FSNQIVGGIMALVMGIVTMVRLTRTMPKK 487


Top