BLASTX nr result

ID: Bupleurum21_contig00032424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032424
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera]   184   2e-44
ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein...   168   2e-39
ref|XP_003631341.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe...   159   8e-37
emb|CBI27456.3| unnamed protein product [Vitis vinifera]              159   8e-37
emb|CAN70012.1| hypothetical protein VITISV_017115 [Vitis vinifera]   156   7e-36

>emb|CAN81449.1| hypothetical protein VITISV_011174 [Vitis vinifera]
          Length = 891

 Score =  184 bits (468), Expect = 2e-44
 Identities = 105/222 (47%), Positives = 134/222 (60%), Gaps = 8/222 (3%)
 Frame = +1

Query: 238 TSSLRSPVPMKLEQHHSID--------MTPPPHLPRPSSTTLLTPKHTSFKLPSDIYLSV 393
           T+  R P P+ +    S++         TP P +P  S   +LT        PS   LS 
Sbjct: 263 TTQKRKPSPLPMMAESSVEGAAGTHVLSTPSPQVPNGSEIEILTSPQNM--TPSLDPLS- 319

Query: 394 NERKKYLATCVPLYEAALKGDWQTTKKIIDECPNVTNVCITKNKETALHIASSTKHTQFV 573
            +R  YL  C+PLY+AALKGDW+T K I +  P    V IT+N +T LHIA++ K T FV
Sbjct: 320 GDRAFYLNVCIPLYQAALKGDWETAKGIFEIHPTAVRVRITRNLDTVLHIAAAAKRTHFV 379

Query: 574 EKLVKKMKPEDLELQNDNSNTALCLAAAAGTVKIAEIMVDMNPNLVTIRGNNNMSPIFMA 753
           E++V  M P DLELQN+NSNTA C AAAAGTV+IAE+MV  N +L  IRGN  M P+ MA
Sbjct: 380 EEVVGLMDPNDLELQNENSNTAFCFAAAAGTVRIAEVMVKKNDHLPMIRGNQQMMPLHMA 439

Query: 754 ALFGHKDMVSYLYLKSDHMQGTEWTDMDRIMLLHACISAKLY 879
           AL GH +MV YLY K++H    +  D D I +L+ CIS  LY
Sbjct: 440 ALLGHSEMVWYLYNKTNHQ---DLKDEDWIGILNTCISTDLY 478


>ref|XP_002271486.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 563

 Score =  168 bits (425), Expect = 2e-39
 Identities = 88/177 (49%), Positives = 116/177 (65%), Gaps = 2/177 (1%)
 Frame = +1

Query: 355 TSFKLPSDIYLSVNERKKYLATCVPLYEAALKGDWQTTKKIIDECPNVTNVCITKNKETA 534
           TS +  S + L   ER  YL  C+PLY AA+KGDW+T + I    P    + IT+ ++T 
Sbjct: 34  TSPQPMSPLVLLSGERYLYLTVCIPLYGAAMKGDWKTAEGIFKMFPPAVRMTITQGRDTT 93

Query: 535 LHIASSTKHTQFVEKLVKKMKPEDLELQNDNSNTALCLAAAAGTVKIAEIMVDMNPNLVT 714
           LHIA++ KH QFVE++VK M+P+DLELQN  SNTALC AAA+G V+IAE+MV  N NL  
Sbjct: 94  LHIAAAAKHVQFVEEMVKMMEPKDLELQNKYSNTALCFAAASGIVRIAEVMVKKNENLPM 153

Query: 715 IRGNNNMSPIFMAALFGHKDMVSYLYLKS--DHMQGTEWTDMDRIMLLHACISAKLY 879
           I+G   M P+ MAAL GH +MV YLY K+  +H+   +W     + LL+ CIS  LY
Sbjct: 154 IQGGGGMIPLHMAALLGHSEMVRYLYNKTVHEHLAPGDW-----VGLLNTCISTDLY 205


>ref|XP_003631341.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein
           At3g12360-like [Vitis vinifera]
          Length = 602

 Score =  159 bits (402), Expect = 8e-37
 Identities = 88/175 (50%), Positives = 111/175 (63%)
 Frame = +1

Query: 355 TSFKLPSDIYLSVNERKKYLATCVPLYEAALKGDWQTTKKIIDECPNVTNVCITKNKETA 534
           TS +  S + L   +R  YLA C+PLY AA+KGDW+T K I +  P      IT   +T 
Sbjct: 28  TSPEQMSPVDLISGDRDLYLAVCIPLYRAAMKGDWKTAKGIFEMFPAAVRFTITPGGDTT 87

Query: 535 LHIASSTKHTQFVEKLVKKMKPEDLELQNDNSNTALCLAAAAGTVKIAEIMVDMNPNLVT 714
           LHIA++ KH  FVE++VK M+PEDLEL+N  SNTA   AAAAG V IA+ MV  N  L  
Sbjct: 88  LHIAAAAKHVYFVEEMVKIMEPEDLELKNQYSNTAFWFAAAAGIVGIAKAMVKKNEILPM 147

Query: 715 IRGNNNMSPIFMAALFGHKDMVSYLYLKSDHMQGTEWTDMDRIMLLHACISAKLY 879
           IR  + M+P+ +AAL GH +MV YLY K+DH Q    T  D + LL+ACIS  LY
Sbjct: 148 IRAYDEMTPLHVAALLGHSEMVWYLYNKTDHEQ---LTVSDWVKLLNACISTDLY 199


>emb|CBI27456.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  159 bits (402), Expect = 8e-37
 Identities = 88/175 (50%), Positives = 111/175 (63%)
 Frame = +1

Query: 355 TSFKLPSDIYLSVNERKKYLATCVPLYEAALKGDWQTTKKIIDECPNVTNVCITKNKETA 534
           TS +  S + L   +R  YLA C+PLY AA+KGDW+T K I +  P      IT   +T 
Sbjct: 28  TSPEQMSPVDLISGDRDLYLAVCIPLYRAAMKGDWKTAKGIFEMFPAAVRFTITPGGDTT 87

Query: 535 LHIASSTKHTQFVEKLVKKMKPEDLELQNDNSNTALCLAAAAGTVKIAEIMVDMNPNLVT 714
           LHIA++ KH  FVE++VK M+PEDLEL+N  SNTA   AAAAG V IA+ MV  N  L  
Sbjct: 88  LHIAAAAKHVYFVEEMVKIMEPEDLELKNQYSNTAFWFAAAAGIVGIAKAMVKKNEILPM 147

Query: 715 IRGNNNMSPIFMAALFGHKDMVSYLYLKSDHMQGTEWTDMDRIMLLHACISAKLY 879
           IR  + M+P+ +AAL GH +MV YLY K+DH Q    T  D + LL+ACIS  LY
Sbjct: 148 IRAYDEMTPLHVAALLGHSEMVWYLYNKTDHEQ---LTVSDWVKLLNACISTDLY 199


>emb|CAN70012.1| hypothetical protein VITISV_017115 [Vitis vinifera]
          Length = 561

 Score =  156 bits (394), Expect = 7e-36
 Identities = 86/175 (49%), Positives = 110/175 (62%)
 Frame = +1

Query: 355 TSFKLPSDIYLSVNERKKYLATCVPLYEAALKGDWQTTKKIIDECPNVTNVCITKNKETA 534
           TS +  S + L   +R  YLA C+PLY AA+KGDW+T K I +  P    + IT   +T 
Sbjct: 28  TSPEQMSPVDLLSGDRDLYLAVCIPLYRAAMKGDWKTAKGIFEMFPAAVRLTITPGGDTT 87

Query: 535 LHIASSTKHTQFVEKLVKKMKPEDLELQNDNSNTALCLAAAAGTVKIAEIMVDMNPNLVT 714
           LHIA++ KH  FVE++VK M+PEDLEL+N  SNTA   AAAAG V IA+ M   N  L  
Sbjct: 88  LHIAAAAKHVYFVEEMVKIMEPEDLELKNQYSNTAFWFAAAAGIVGIAKAMXKKNEILPM 147

Query: 715 IRGNNNMSPIFMAALFGHKDMVSYLYLKSDHMQGTEWTDMDRIMLLHACISAKLY 879
           IR  + M+P+ +AAL GH +MV YLY K+DH      T  D + LL+ACIS  LY
Sbjct: 148 IRAYDEMTPLHVAALLGHSEMVWYLYNKTDH---EXLTVSDWVKLLNACISTDLY 199


Top