BLASTX nr result

ID: Bupleurum21_contig00032422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032422
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    88   6e-16
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    88   6e-16
ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    85   5e-15

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
 Frame = +1

Query: 31   KSSFGCLLRDDKGAFIAGYAGCLVGVLDPKLAEALAFREALSWLKQMQVSQVHIELDSLL 210
            K + G + RD +G F+ G+A        PK+ EAL  RE LSW+ +   S++ +E D L 
Sbjct: 684  KGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLR 743

Query: 211  VVQAFESNKHDSSYLSSIIADCQVLVKDLRSYSVYFVRRSANSAAHALAREAGSLTGRKE 390
            VVQA +     ++    II DC  +++ L    V + RRSANSAAH LA  A S T    
Sbjct: 744  VVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHI 803

Query: 391  W-FETPSFLIDVLSHDL 438
            W +  P  ++  L +D+
Sbjct: 804  WGYTPPQCILSCLHYDV 820


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/112 (41%), Positives = 69/112 (61%)
 Frame = +1

Query: 25  SYKSSFGCLLRDDKGAFIAGYAGCLVGVLDPKLAEALAFREALSWLKQMQVSQVHIELDS 204
           S +S FG ++RD  G+F+ G  G   G+ + KLAEA+  REA+ W+  +  S V  E D+
Sbjct: 188 SGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDA 247

Query: 205 LLVVQAFESNKHDSSYLSSIIADCQVLVKDLRSYSVYFVRRSANSAAHALAR 360
            +VV A  S   D     ++IADC++L++   +YSV F+R+ AN  AH+LAR
Sbjct: 248 KVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLAR 299


>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/140 (35%), Positives = 73/140 (52%)
 Frame = +1

Query: 7   QTSGIPSYKSSFGCLLRDDKGAFIAGYAGCLVGVLDPKLAEALAFREALSWLKQMQVSQV 186
           +T G    K     ++ D  G F+A  A  ++G+ +P+LAEA+A +EA+ W  QM+ S V
Sbjct: 76  RTQGTNEMKIGMAAVVSDSNGTFVACMAHAVLGLFEPRLAEAVALKEAIRWAIQMRFSLV 135

Query: 187 HIELDSLLVVQAFESNKHDSSYLSSIIADCQVLVKDLRSYSVYFVRRSANSAAHALAREA 366
             E DS + V A  S   D S    II +C+ L+    ++ VYFV+R AN  AH LA  +
Sbjct: 136 VFESDSKIAVDAIRSLAADWSEFGIIIDECRSLLSLGLNFQVYFVKRQANMVAHVLAMSS 195

Query: 367 GSLTGRKEWFETPSFLIDVL 426
            S      W   PS +  +L
Sbjct: 196 YSYASLATWNVIPSCVEAIL 215


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/127 (35%), Positives = 69/127 (54%)
 Frame = +1

Query: 19  IPSYKSSFGCLLRDDKGAFIAGYAGCLVGVLDPKLAEALAFREALSWLKQMQVSQVHIEL 198
           + + +  FG + ++D G F A   G + G LDP++AEAL+ RE L W+K + ++ V  E 
Sbjct: 147 VANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWVKGLDLNYVVSES 206

Query: 199 DSLLVVQAFESNKHDSSYLSSIIADCQVLVKDLRSYSVYFVRRSANSAAHALAREAGSLT 378
           D L +V A      +SS    +I DC+  +K++    + FV+R  N  AH LAR   S  
Sbjct: 207 DCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHLLARVTDSEV 266

Query: 379 GRKEWFE 399
              EWF+
Sbjct: 267 DHGEWFD 273


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/110 (40%), Positives = 62/110 (56%)
 Frame = +1

Query: 43  GCLLRDDKGAFIAGYAGCLVGVLDPKLAEALAFREALSWLKQMQVSQVHIELDSLLVVQA 222
           GC+++D  G F+   A    G   P++AE LA +EALSW +  Q+  V  ELD L +V+A
Sbjct: 54  GCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCLHIVEA 113

Query: 223 FESNKHDSSYLSSIIADCQVLVKDLRSYSVYFVRRSANSAAHALAREAGS 372
                 D S L  II DC++L   + + S  FV+RS N  AH LAR + S
Sbjct: 114 LLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLARVSNS 163


Top