BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032420
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       226   6e-57
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   222   2e-55
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           205   1e-50
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   205   1e-50
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   202   9e-50

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  226 bits (577), Expect = 6e-57
 Identities = 143/386 (37%), Positives = 212/386 (54%), Gaps = 13/386 (3%)
 Frame = +2

Query: 2    PWCVMGDFNAFISLDETASGSS-RWTTSMIEFKDCLFSLGITDLNYIGCPFTWWDKSRSQ 178
            PW V+GDFN  ++  E ++  S     +M +F+DCL +  ++DL Y G  FTWW+KS + 
Sbjct: 138  PWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSDLRYKGNTFTWWNKSHTT 197

Query: 179  PLVRKLDRVLVNTSWINVFPNSFANFLPRGLSDHSPATVCLGQAQVKLNKPFQVFHHMLT 358
            P+ +K+DR+LVN SW  +FP+S   F     SDH    V L +  +K  +PF+ F+++L 
Sbjct: 198  PVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLEETSIKAKRPFKFFNYLLK 257

Query: 359  HPDFLNVVKEAWDT-PISGDSWFILTSKLKLVKSGLK---RLN-SLVGNVQSAVHIARID 523
            + DFLN+V++ W T  + G S F ++ KLK +K  +K   RLN S +       H   I 
Sbjct: 258  NLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNYSELEKRTKEAHDFLIG 317

Query: 524  LHNFQAALPNIPSQAQLDEEA-RLLGIFSSALDIEEQFLRQKSKAHWLKSGDGNNKYFFN 700
              +   A P  P  A  + EA R   I ++A   EE F RQKS+  W   GDGN KYF  
Sbjct: 318  CQDRTLADPT-PINASFELEAERKWHILTAA---EESFFRQKSRISWFAEGDGNTKYFHR 373

Query: 701  YCRGRWNNNKIVGLLDSTGSIVTNHAELASIAVDHFKDVIGEERPVDPFPDD------LI 862
                R ++N I  L D  G +V +   +  +   +F  ++G+E  VDP+  +      L+
Sbjct: 374  MADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDE--VDPYLMEQNDMNLLL 431

Query: 863  LPKLLDSQKSGLIANVTPAEILRALKSMAKNKSPGPDGFSPEFYLTTWDIVGADVIAGIS 1042
              +   +Q   L +  +  +I  AL S+ +NKS GPDGF+ EF++ +W IVGA+V   I 
Sbjct: 432  SYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEFFIDSWSIVGAEVTDAIK 491

Query: 1043 SFFTSLHLLRIINATAISLIPKENSP 1120
             FF+S  LL+  NAT I LIPK  +P
Sbjct: 492  EFFSSGCLLKQWNATTIVLIPKIVNP 517


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  222 bits (565), Expect = 2e-55
 Identities = 130/379 (34%), Positives = 202/379 (53%), Gaps = 9/379 (2%)
 Frame = +2

Query: 2    PWCVMGDFNAFISLDETASGSSRWTTSMIEFKDCLFSLGITDLNYIGCPFTWWDKSRSQP 181
            PW ++GDFN  +   + ++G SR T  M EF++CL +  I+DL + G  +TWW+   + P
Sbjct: 137  PWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWNNQENNP 196

Query: 182  LVRKLDRVLVNTSWINVFPNSFANFLPRGLSDHSPATVCLGQAQVKLNKPFQVFHHMLTH 361
            + +K+DR+LVN SW+   P S+ +F     SDH P+ V +       NKPF++ + ++ H
Sbjct: 197  IAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHH 256

Query: 362  PDFLNVVKEAWD-TPISGDSWFILTSKLKLVKSGLKRLN-SLVGNVQSAVHIARIDLHNF 535
            P+F+  ++  WD     G + F L+ K K +K  ++  N      ++  V  A  +L   
Sbjct: 257  PEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQAAQNLKTC 316

Query: 536  QAALPNIPSQ--AQLDEEARLLGIFSSALDIEEQFLRQKSKAHWLKSGDGNNKYFFNYCR 709
            Q  L   PS   A L++EA     ++     EE+FL QKS+  WLK GD N  +F     
Sbjct: 317  QNNLLAAPSSYLAGLEKEAH--RSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMT 374

Query: 710  GRWNNNKIVGLLDSTGSIVTNHAELASIAVDHFKDVIGEERPVDPFP-----DDLILPKL 874
             R   N+I  LLD TG  + N  EL +  VD FK++ G    +         + L   K 
Sbjct: 375  ARRAINEIHYLLDQTGRRIENTDELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKC 434

Query: 875  LDSQKSGLIANVTPAEILRALKSMAKNKSPGPDGFSPEFYLTTWDIVGADVIAGISSFFT 1054
             ++ +  L A V+ A+I     ++  NKSPGPDG++ EF+  TW IVG  +IA +  FF 
Sbjct: 435  DENTRQLLEAEVSEADIKSEFFALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFR 494

Query: 1055 SLHLLRIINATAISLIPKE 1111
            S  LL   N+TA++++PK+
Sbjct: 495  SGRLLGQWNSTAVTMVPKK 513


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  205 bits (522), Expect = 1e-50
 Identities = 132/379 (34%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
 Frame = +2

Query: 11   VMGDFNAFISLDETASGSS-RWTTSMIEFKDCLFSLGITDLNYIGCPFTWWDKSRSQPLV 187
            ++GDFN  +   E ++  S      M +F  CL  + ++DL + G  FTWW+KS  +P+ 
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60

Query: 188  RKLDRVLVNTSWINVFPNSFANFLPRGLSDHSPATVCLGQAQVKLNKPFQVFHHMLTHPD 367
            +KLDR+L N SW N++P+S   F     SDH    V L    +   +PF+ F+ +L + D
Sbjct: 61   KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120

Query: 368  FLNVVKEAW-DTPISGDSWFILTSKLKLVKSGLK---RLN-SLVGNVQSAVHIARIDLHN 532
            FLNVV + W  T + G S + ++ KLK +K  +K   RLN S +       H   I   N
Sbjct: 121  FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 533  FQAALPNIPSQAQLDEEARLLGIFSSALDIEEQFLRQKSKAHWLKSGDGNNKYFFNYCRG 712
               A P++ S A L+ EA+   +  S    EE F  Q+S+  W   GD N  YF      
Sbjct: 181  LTLANPSV-SNAALELEAQRKWVLLSC--AEESFFHQRSRVSWFAEGDSNTHYFHRMVDS 237

Query: 713  RWNNNKIVGLLDSTGSIVTNHAELASIAVDHFKDVIGE-ERPVDPFPDD---LILPKLLD 880
            R + N I  L+DS G ++ +   +    V +++ ++G  E P     +D   L+  +   
Sbjct: 238  RKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQ 297

Query: 881  SQKSGLIANVTPAEILRALKSMAKNKSPGPDGFSPEFYLTTWDIVGADVIAGISSFFTSL 1060
             Q S L  + T  EI  A KS+ +NK+ GPDG+S EF+  TW I+G +V+A I  FF S 
Sbjct: 298  DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357

Query: 1061 HLLRIINATAISLIPKENS 1117
             LL+  NAT + LIPK ++
Sbjct: 358  QLLKQWNATTLVLIPKTSN 376


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  205 bits (522), Expect = 1e-50
 Identities = 132/379 (34%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
 Frame = +2

Query: 11   VMGDFNAFISLDETASGSS-RWTTSMIEFKDCLFSLGITDLNYIGCPFTWWDKSRSQPLV 187
            ++GDFN  +   E ++  S      M +F  CL  + ++DL + G  FTWW+KS  +P+ 
Sbjct: 1    MLGDFNQVLLPQEHSNPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIA 60

Query: 188  RKLDRVLVNTSWINVFPNSFANFLPRGLSDHSPATVCLGQAQVKLNKPFQVFHHMLTHPD 367
            +KLDR+L N SW N++P+S   F     SDH    V L    +   +PF+ F+ +L + D
Sbjct: 61   KKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNED 120

Query: 368  FLNVVKEAW-DTPISGDSWFILTSKLKLVKSGLK---RLN-SLVGNVQSAVHIARIDLHN 532
            FLNVV + W  T + G S + ++ KLK +K  +K   RLN S +       H   I   N
Sbjct: 121  FLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLITCQN 180

Query: 533  FQAALPNIPSQAQLDEEARLLGIFSSALDIEEQFLRQKSKAHWLKSGDGNNKYFFNYCRG 712
               A P++ S A L+ EA+   +  S    EE F  Q+S+  W   GD N  YF      
Sbjct: 181  LTLANPSV-SNAALELEAQRKWVLLSC--AEESFFHQRSRVSWFAEGDSNTHYFHRMVDS 237

Query: 713  RWNNNKIVGLLDSTGSIVTNHAELASIAVDHFKDVIGE-ERPVDPFPDD---LILPKLLD 880
            R + N I  L+DS G ++ +   +    V +++ ++G  E P     +D   L+  +   
Sbjct: 238  RKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQEDMNLLLTYRCSQ 297

Query: 881  SQKSGLIANVTPAEILRALKSMAKNKSPGPDGFSPEFYLTTWDIVGADVIAGISSFFTSL 1060
             Q S L  + T  EI  A KS+ +NK+ GPDG+S EF+  TW I+G +V+A I  FF S 
Sbjct: 298  DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357

Query: 1061 HLLRIINATAISLIPKENS 1117
             LL+  NAT + LIPK ++
Sbjct: 358  QLLKQWNATTLVLIPKTSN 376


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score =  202 bits (515), Expect = 9e-50
 Identities = 128/380 (33%), Positives = 198/380 (52%), Gaps = 11/380 (2%)
 Frame = +2

Query: 2    PWCVMGDFNAFISLDETASGSS-RWTTSMIEFKDCLFSLGITDLNYIGCPFTWWDKSRSQ 178
            PW ++GDFN  +   E +  +S      M  F+DCLF   + DL + G  FTWW+KS ++
Sbjct: 87   PWIMLGDFNQVLCPAEHSQATSLNVNRRMKVFRDCLFEAELCDLVFKGNTFTWWNKSATR 146

Query: 179  PLVRKLDRVLVNTSWINVFPNSFANFLPRGLSDHSPATVCLGQAQVKLNKPFQVFHHMLT 358
            P+ +KLDR+LVN SW + FP+++A F     SDH+   V +     +  +PF+ ++ +L 
Sbjct: 147  PVAKKLDRILVNESWCSRFPSAYAVFGEPDFSDHASCGVIINPLMHREKRPFRFYNFLLQ 206

Query: 359  HPDFLNVVKEAW-DTPISGDSWFILTSKLKLVKS-----GLKRLNSLVGNVQSAVHIARI 520
            +PDF+++V E W    + G S F ++ KLK +K+      ++  ++L   V+ A H   +
Sbjct: 207  NPDFISLVGELWYSINVVGSSMFKMSKKLKALKNPIRTFSMENFSNLEKRVKEA-HNLVL 265

Query: 521  DLHNFQAALPNIPSQAQLDEEARLLGIFSSALDIEEQFLRQKSKAHWLKSGDGNNKYFFN 700
               N   + P IP+ A   E  R   I   A   EE F  Q+S+  W+  GD N  YF  
Sbjct: 266  YRQNKTLSDPTIPNAALEMEAQRKWLILVKA---EESFFCQRSRVTWMGEGDSNTSYFHR 322

Query: 701  YCRGRWNNNKIVGLLDSTGSIVTNHAELASIAVDHFKDVIGEE--RPVDPFPD-DLILP- 868
                R   N I  ++D  G  +     +    +++F +++G E   P+    D DL+LP 
Sbjct: 323  MADSRKAVNTIHIIIDDNGVKIDTQLGIKEHCIEYFSNLLGGEVGPPMLIQEDFDLLLPF 382

Query: 869  KLLDSQKSGLIANVTPAEILRALKSMAKNKSPGPDGFSPEFYLTTWDIVGADVIAGISSF 1048
            +    QK  L  + +  +I  A  S   NK+ GPDGF  EF+  TW ++G +V   +S F
Sbjct: 383  RCSHDQKKELAMSFSRQDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEF 442

Query: 1049 FTSLHLLRIINATAISLIPK 1108
            FTS  LL+  NAT + LIPK
Sbjct: 443  FTSSVLLKQWNATTLVLIPK 462