BLASTX nr result

ID: Bupleurum21_contig00032408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032408
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36933.3| unnamed protein product [Vitis vinifera]              120   1e-25
emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]   120   1e-25
ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At...   108   6e-22
ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_004136156.1| PREDICTED: uncharacterized protein LOC101219...   104   8e-21

>emb|CBI36933.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = -1

Query: 480 KPGYSLERFVQFDTHAWAEKSFNNLVNKSKTKITPTNDGEDCNLLRPEVREPPSHCGHNN 301
           KPGYSLER VQ++THAWAEKSF NL+N+S+  +      ED   L      PP +   N+
Sbjct: 268 KPGYSLERHVQYNTHAWAEKSFANLINRSEEIV------EDLANL-----TPPDNQDIND 316

Query: 300 LPCQSCGSCEKGEDLLICGKKNN--GCGIAMHISCCDPPLPNVPKEGWLCHKC 148
           L C+ CGS E+GE +LICG ++   GCG+  HI CCDPPL  VP+E W C KC
Sbjct: 317 LNCEVCGSHERGEVMLICGNESGSIGCGVGTHIDCCDPPLTEVPEEDWFCPKC 369


>emb|CAN62071.1| hypothetical protein VITISV_036193 [Vitis vinifera]
          Length = 1391

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = -1

Query: 480  KPGYSLERFVQFDTHAWAEKSFNNLVNKSKTKITPTNDGEDCNLLRPEVREPPSHCGHNN 301
            KPGYSLER VQ++THAWAEKSF NL+N+S+  +      ED   L      PP +   N+
Sbjct: 1112 KPGYSLERHVQYNTHAWAEKSFANLINRSEEIV------EDLANL-----TPPDNQDIND 1160

Query: 300  LPCQSCGSCEKGEDLLICGKKNN--GCGIAMHISCCDPPLPNVPKEGWLCHKC 148
            L C+ CGS E+GE +LICG ++   GCG+  HI CCDPPL  VP+E W C KC
Sbjct: 1161 LNCEVCGSHERGEVMLICGNESGSIGCGVGTHIDCCDPPLTEVPEEDWFCPKC 1213


>ref|XP_002270203.2| PREDICTED: BRCT domain-containing protein At4g02110-like [Vitis
            vinifera]
          Length = 1314

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/106 (51%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = -1

Query: 480  KPGYSLERFVQFDTHAWAEKSFNNLVNKSKTKITPTNDGEDCNLLRPEVREPPSHCGHNN 301
            KPGYSLER VQ++THAWAEKSF NL+N+S+  +      ED   L      PP +   N+
Sbjct: 1124 KPGYSLERHVQYNTHAWAEKSFANLINRSEEIV------EDLANL-----TPPDNQDIND 1172

Query: 300  LPCQSCGSCEKGEDLLICGKKNN--GCGIAMHISCCDPPLPNVPKE 169
            L C+ CGS E+GE +LICG ++   GCG+  HI CCDPPL  VP+E
Sbjct: 1173 LNCEVCGSHERGEVMLICGNESGSIGCGVGTHIDCCDPPLTEVPEE 1218


>ref|XP_002320980.1| predicted protein [Populus trichocarpa] gi|222861753|gb|EEE99295.1|
            predicted protein [Populus trichocarpa]
          Length = 1282

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = -1

Query: 480  KPGYSLERFVQFDTHAWAEKSFNNLVNKSKTKITPTNDGEDCNLLRPEVREPPSHCGHNN 301
            KPGYSLER V ++T+ WAEKSF+NL++K++  +   + G+D                   
Sbjct: 1135 KPGYSLERHVLYNTNDWAEKSFSNLLSKAEEIVEDCDSGDD------------------- 1175

Query: 300  LPCQSCGSCEKGEDLLICGKKNN--GCGIAMHISCCDPPLPNVPKEGWLCHKC 148
            + C+ CGS E+GE +LIC  ++   GCG+ MHI CCDPPL ++P+E W C KC
Sbjct: 1176 IACEVCGSRERGEVMLICSDESGSVGCGVGMHIDCCDPPLESIPEEDWFCPKC 1228


>ref|XP_004136156.1| PREDICTED: uncharacterized protein LOC101219784 [Cucumis sativus]
          Length = 1372

 Score =  104 bits (259), Expect = 8e-21
 Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = -1

Query: 480  KPGYSLERFVQFDTHAWAEKSFNNLVNKSKTKITPTNDGEDCNLLRPEVREPPSHCGHNN 301
            KPGY L++ V ++THAWAE+SF+NL +K++      +  +DC+               N+
Sbjct: 1253 KPGYPLDKHVLYNTHAWAERSFSNLQSKAEEVAEDLSSQDDCS--------------DND 1298

Query: 300  LPCQSCGSCEKGEDLLICGKK--NNGCGIAMHISCCDPPLPNVPKEGWLCHKC 148
            + CQ CGS ++GE +LICG +  ++GCGI MH  CC+PPL ++P+  W C  C
Sbjct: 1299 IACQECGSRDRGEVMLICGNEDGSSGCGIGMHTDCCNPPLLDIPEGDWFCSDC 1351


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