BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032405
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    86   9e-15
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             85   1e-14
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    85   1e-14
ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002335867.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268  PSAKINIFTGRYEKPISVIAFFDTGASSSIMKPDILPKHYWNACYKTFRAANSNSFEITL 89
            P  ++ I+T +++KPISVIAF+DTGA+ SIM P ILP  YW   ++ F  A+      T+
Sbjct: 1204 PQTEVKIYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDGILTTTV 1263

Query: 88   ISK-PINIQLFPGYII*HQVYGSELPGKDL 2
             +K PI I+ FPG+    ++ GS++PGKDL
Sbjct: 1264 KTKHPITIEFFPGFKYTTKLLGSDIPGKDL 1293


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268  PSAKINIFTGRYEKPISVIAFFDTGASSSIMKPDILPKHYWNACYKTFRAANSNSFEITL 89
            P  ++ ++T +++KPISVIAF+DTGA+ SIM P ILP  YW   ++ F  A+      T+
Sbjct: 1205 PQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDGILTTTV 1264

Query: 88   ISK-PINIQLFPGYII*HQVYGSELPGKDL 2
             +K PI I+ FPG+    ++ GS++PGKDL
Sbjct: 1265 KTKHPITIEFFPGFKYTTKLLGSDIPGKDL 1294


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -3

Query: 268  PSAKINIFTGRYEKPISVIAFFDTGASSSIMKPDILPKHYWNACYKTFRAANSNSFEITL 89
            P  ++ ++T +++KPISVIAF+DTGA+ SIM P ILP  YW   ++ F  A+      T+
Sbjct: 1205 PQTEVKVYTSKWDKPISVIAFYDTGAAYSIMDPAILPSEYWIPHFRHFGTADDGILTTTV 1264

Query: 88   ISK-PINIQLFPGYII*HQVYGSELPGKDL 2
             +K PI I+ FPG+    ++ GS++PGKDL
Sbjct: 1265 KTKHPITIEFFPGFKYTTKLLGSDIPGKDL 1294


>ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|222859068|gb|EEE96615.1|
            predicted protein [Populus trichocarpa]
          Length = 1497

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277  HRSPSAKINIFTGRYEKPISVIAFFDTGASSSIMKPDILPKHYWNACYKTFRAANSNSFE 98
            H  P A ++IFT  Y KPI  IA FDTGA  +I  P +LP H W    + FRAA++  F 
Sbjct: 1115 HPIPLAPVSIFTSTYAKPIKAIALFDTGAHRTIFNPKVLPPHCWVTHREYFRAADNQVFC 1174

Query: 97   ITLISK-PINIQLFPGYII*HQVYGSELPGKDL 2
                +K PI IQ+ P   +   V GS LPGKDL
Sbjct: 1175 TQYKTKRPITIQILPQCSVKTYVLGSPLPGKDL 1207


>ref|XP_002335867.1| predicted protein [Populus trichocarpa] gi|222835938|gb|EEE74359.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 HRSPSAKINIFTGRYEKPISVIAFFDTGASSSIMKPDILPKHYWNACYKTFRAANSNSFE 98
           H  P A ++IFT  Y KPI  IA FDTGA  +I  P +LP H W    + FRAA++  F 
Sbjct: 412 HPIPLAPVSIFTSTYAKPIKAIALFDTGAHRTIFNPKVLPPHCWVTHREYFRAADNQVFC 471

Query: 97  ITLISK-PINIQLFPGYII*HQVYGSELPGKDL 2
               +K PI IQ+ P   +   V GS LPGKDL
Sbjct: 472 TQYKTKRPITIQILPQCSVKTYVLGSPLPGKDL 504