BLASTX nr result

ID: Bupleurum21_contig00032396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032396
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]   125   5e-27
ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265...   123   1e-26
ref|XP_003552937.1| PREDICTED: uncharacterized protein LOC100810...   123   2e-26
ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004174147.1| PREDICTED: uncharacterized LOC101222335, par...   120   2e-25

>emb|CAN60458.1| hypothetical protein VITISV_019556 [Vitis vinifera]
          Length = 231

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/82 (76%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
 Frame = +2

Query: 296 STRGGEEGAPSSSAVSTAVDGGG----STAAPPSRYESQKRRDWNTFLQYLKNHKPPLTL 463
           S  GG    PSS    +A  GGG    S+ APPSRYESQKRRDWNTFLQYLKNHKPPLTL
Sbjct: 3   SASGGGAADPSSGEGPSAGGGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTL 62

Query: 464 ARCSGAHVIEFLKYLDQFGKTK 529
           ARCSGAHVIEFLKYLDQFGKTK
Sbjct: 63  ARCSGAHVIEFLKYLDQFGKTK 84


>ref|XP_002278283.1| PREDICTED: uncharacterized protein LOC100265705 [Vitis vinifera]
          Length = 231

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/82 (75%), Positives = 64/82 (78%), Gaps = 4/82 (4%)
 Frame = +2

Query: 296 STRGGEEGAPSSSAVSTAVDGGG----STAAPPSRYESQKRRDWNTFLQYLKNHKPPLTL 463
           S  GG    PS     +A  GGG    S+ APPSRYESQKRRDWNTFLQYLKNHKPPLTL
Sbjct: 3   SASGGGAADPSGGEGPSAGGGGGAAEGSSPAPPSRYESQKRRDWNTFLQYLKNHKPPLTL 62

Query: 464 ARCSGAHVIEFLKYLDQFGKTK 529
           ARCSGAHVIEFLKYLDQFGKTK
Sbjct: 63  ARCSGAHVIEFLKYLDQFGKTK 84


>ref|XP_003552937.1| PREDICTED: uncharacterized protein LOC100810350 [Glycine max]
          Length = 229

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/77 (76%), Positives = 65/77 (84%), Gaps = 5/77 (6%)
 Frame = +2

Query: 314 EGAPSSSAVSTAVDG-----GGSTAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSG 478
           E AP+S + + A+       GGS+ APPSRYESQKRRDWNTFLQYL+NHKPPLTLARCSG
Sbjct: 17  EAAPASGSSAPAISAAAPQPGGSSPAPPSRYESQKRRDWNTFLQYLQNHKPPLTLARCSG 76

Query: 479 AHVIEFLKYLDQFGKTK 529
           AHVIEFLKYLDQFGKTK
Sbjct: 77  AHVIEFLKYLDQFGKTK 93


>ref|XP_002313971.1| predicted protein [Populus trichocarpa] gi|222850379|gb|EEE87926.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  120 bits (302), Expect = 1e-25
 Identities = 61/92 (66%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
 Frame = +2

Query: 272 TKNMDSSASTRGGEEGAPSSSAVSTAV------DGGGSTAAPPSRYESQKRRDWNTFLQY 433
           T  + S+     GE G  + S+ ++A         G S  APPSRYESQKRRDWNTFLQY
Sbjct: 4   TSGVASAPDPNSGEPGPSAGSSSASASLPQQQQPEGSSPPAPPSRYESQKRRDWNTFLQY 63

Query: 434 LKNHKPPLTLARCSGAHVIEFLKYLDQFGKTK 529
           LKNHKPPLTLARCSGAHVIEFLKYLDQFGKTK
Sbjct: 64  LKNHKPPLTLARCSGAHVIEFLKYLDQFGKTK 95


>ref|XP_004174147.1| PREDICTED: uncharacterized LOC101222335, partial [Cucumis sativus]
          Length = 207

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/70 (80%), Positives = 59/70 (84%)
 Frame = +2

Query: 320 APSSSAVSTAVDGGGSTAAPPSRYESQKRRDWNTFLQYLKNHKPPLTLARCSGAHVIEFL 499
           A   S+ +    GGG+  APPSRYESQKRRDWNTFLQYLKNHKPPL LARCSGAHVIEFL
Sbjct: 3   AEGCSSATGGGGGGGAAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFL 62

Query: 500 KYLDQFGKTK 529
           KYLDQFGKTK
Sbjct: 63  KYLDQFGKTK 72


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