BLASTX nr result

ID: Bupleurum21_contig00032393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032393
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524414.1| PREDICTED: uncharacterized protein LOC100796...   129   3e-28
ref|XP_003532465.1| PREDICTED: uncharacterized protein LOC100797...   125   5e-27
emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]   125   5e-27
ref|XP_002324157.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002308587.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_003524414.1| PREDICTED: uncharacterized protein LOC100796396 [Glycine max]
          Length = 1411

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/127 (51%), Positives = 79/127 (62%)
 Frame = -3

Query: 381 HGDYTXXXXXXXXXXXXXXPLSCKDGLNGTGSLNTSCKLDYDLNFTDNVYIFGEGDLIVH 202
           +GDYT               L+C +GLNGTGSL T+C L+  L F  +VYI G G L + 
Sbjct: 41  YGDYTPPSPPPPPPLPHPPSLTCLEGLNGTGSLTTTCDLNSSLIFNSDVYIEGNGSLNIL 100

Query: 201 PGVKLSCPRLGCEFIVNISGEFKLGLGAVIVAGSVHVVAENATFMNGSMINVTALAGSPP 22
           PGV LSCP  GC  ++N+S EF L  GA IVAG+V V + NAT   GS+INVT LAG+PP
Sbjct: 101 PGVNLSCPVSGCVILINVSNEFSLQSGAAIVAGTVLVASRNATLFGGSVINVTGLAGAPP 160

Query: 21  EHTSGRP 1
             TSG P
Sbjct: 161 AQTSGTP 167


>ref|XP_003532465.1| PREDICTED: uncharacterized protein LOC100797714 [Glycine max]
          Length = 1441

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/127 (50%), Positives = 79/127 (62%)
 Frame = -3

Query: 381 HGDYTXXXXXXXXXXXXXXPLSCKDGLNGTGSLNTSCKLDYDLNFTDNVYIFGEGDLIVH 202
           + DYT               L+C++GLNGTGSL T+C L+  L F+ +VYI G G L + 
Sbjct: 70  YADYTPPSPPPPPPLPHPPSLTCQEGLNGTGSLATTCDLNSSLIFSSDVYIEGSGSLNIL 129

Query: 201 PGVKLSCPRLGCEFIVNISGEFKLGLGAVIVAGSVHVVAENATFMNGSMINVTALAGSPP 22
           PGV LSCP  GC   +N+S EF L  GA IVAG+V V + NAT   GS+INVT LAG+PP
Sbjct: 130 PGVNLSCPVSGCVIFINVSIEFSLQSGAAIVAGTVLVASRNATLFGGSVINVTGLAGAPP 189

Query: 21  EHTSGRP 1
             TSG P
Sbjct: 190 AQTSGTP 196


>emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]
          Length = 522

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/128 (49%), Positives = 83/128 (64%)
 Frame = -3

Query: 384 FHGDYTXXXXXXXXXXXXXXPLSCKDGLNGTGSLNTSCKLDYDLNFTDNVYIFGEGDLIV 205
           F+GDYT               LSC+  L G GS +T C+L+  LNF  +VYI G G L +
Sbjct: 43  FNGDYTPPSPPPPASPPHPPSLSCEGDLGGNGSFDTICELNSSLNFGKDVYIEGIGSLHI 102

Query: 204 HPGVKLSCPRLGCEFIVNISGEFKLGLGAVIVAGSVHVVAENATFMNGSMINVTALAGSP 25
             GV +SCP +GC  +VNISGEF +G+ + I+AG+V V A+NA+  +GS+INVTALAG+P
Sbjct: 103 LSGVIVSCPMVGCSILVNISGEFVMGVNSSIIAGTVFVEAQNASLSDGSIINVTALAGAP 162

Query: 24  PEHTSGRP 1
           P  TSG P
Sbjct: 163 PPQTSGTP 170


>ref|XP_002324157.1| predicted protein [Populus trichocarpa] gi|222865591|gb|EEF02722.1|
           predicted protein [Populus trichocarpa]
          Length = 1416

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/129 (44%), Positives = 78/129 (60%)
 Frame = -3

Query: 387 LFHGDYTXXXXXXXXXXXXXXPLSCKDGLNGTGSLNTSCKLDYDLNFTDNVYIFGEGDLI 208
           LFH DY+                SC D L G GS++T+C++  D+N T +VYI G+GD  
Sbjct: 46  LFHQDYSPPSPPPPPPHPPSA--SCTDDLGGIGSIDTACQIVTDVNLTRDVYIEGKGDFY 103

Query: 207 VHPGVKLSCPRLGCEFIVNISGEFKLGLGAVIVAGSVHVVAENATFMNGSMINVTALAGS 28
           +HPGV+  CP  GC   +NISG F L + + I+ G+  +VA NA+F NGS++N T LAG 
Sbjct: 104 IHPGVRFQCPNFGCSITINISGNFNLSVNSSILTGTFELVANNASFFNGSVVNTTGLAGD 163

Query: 27  PPEHTSGRP 1
           PP  TSG P
Sbjct: 164 PPPQTSGTP 172


>ref|XP_002308587.1| predicted protein [Populus trichocarpa] gi|222854563|gb|EEE92110.1|
           predicted protein [Populus trichocarpa]
          Length = 1412

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/129 (44%), Positives = 77/129 (59%)
 Frame = -3

Query: 387 LFHGDYTXXXXXXXXXXXXXXPLSCKDGLNGTGSLNTSCKLDYDLNFTDNVYIFGEGDLI 208
           LFH DY+                SC D L G GS++T C++  D+N T +VYI G+GD  
Sbjct: 50  LFHQDYSPPAPPPPPPHPPSA--SCTDDLGGIGSIDTVCQIVADVNLTRDVYIEGKGDFN 107

Query: 207 VHPGVKLSCPRLGCEFIVNISGEFKLGLGAVIVAGSVHVVAENATFMNGSMINVTALAGS 28
           +HPGV+  CP  GC   +N+SG F L + + IV G+  +VA NA+F NGS++N T LAG 
Sbjct: 108 IHPGVRFHCPNFGCSITINVSGNFNLSVNSSIVTGTFELVANNASFFNGSVVNTTGLAGD 167

Query: 27  PPEHTSGRP 1
           PP  TSG P
Sbjct: 168 PPPQTSGTP 176


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