BLASTX nr result

ID: Bupleurum21_contig00032386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032386
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thali...   115   5e-24
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           114   6e-24
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   114   6e-24
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   110   9e-23
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   106   2e-21

>gb|AAD39277.1|AC007203_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/110 (48%), Positives = 73/110 (66%)
 Frame = +2

Query: 101 AEFPITYLGLPLITSRLNSHHCSSLLSKLYGRTNSWTGRFLSFAGRLQLLKSILMSISSY 280
           ++ P+ YLGLPL+T  + +H    L+ K+  R +SWTGRFLS+ GRLQL+KS+LMSI+++
Sbjct: 10  SQLPVRYLGLPLMTKAMTAHDYLPLIEKIRKRISSWTGRFLSYCGRLQLIKSVLMSITNF 69

Query: 281 WSLYLFLPKNVLKKIQSLFGKFLWGGPINSKPLFKVSWKDCCLPTDEGGL 430
           WS    LP N +K+I+ L   FLW GP       K++W   CLP  EGGL
Sbjct: 70  WSSAFRLPGNCMKEIERLCSAFLWSGPDLKTHNAKIAWSKVCLPMCEGGL 119


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/108 (50%), Positives = 67/108 (62%)
 Frame = +2

Query: 107 FPITYLGLPLITSRLNSHHCSSLLSKLYGRTNSWTGRFLSFAGRLQLLKSILMSISSYWS 286
           FPI YLGLPL+  +L       LL KL  R  SW  + LSFAGR QL+ S++  + ++W 
Sbjct: 620 FPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWM 679

Query: 287 LYLFLPKNVLKKIQSLFGKFLWGGPINSKPLFKVSWKDCCLPTDEGGL 430
               LPK  +KKI+SL  KFLW G I+ +   KVSW DCCLP  EGGL
Sbjct: 680 STFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGL 727


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/108 (50%), Positives = 67/108 (62%)
 Frame = +2

Query: 107 FPITYLGLPLITSRLNSHHCSSLLSKLYGRTNSWTGRFLSFAGRLQLLKSILMSISSYWS 286
           FPI YLGLPL+  +L       LL KL  R  SW  + LSFAGR QL+ S++  + ++W 
Sbjct: 620 FPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWM 679

Query: 287 LYLFLPKNVLKKIQSLFGKFLWGGPINSKPLFKVSWKDCCLPTDEGGL 430
               LPK  +KKI+SL  KFLW G I+ +   KVSW DCCLP  EGGL
Sbjct: 680 STFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGL 727


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/112 (45%), Positives = 71/112 (63%)
 Frame = +2

Query: 95   EIAEFPITYLGLPLITSRLNSHHCSSLLSKLYGRTNSWTGRFLSFAGRLQLLKSILMSIS 274
            E+   P+ YLGLPL+T R+       L+ K+  R  SWT RFLSFAGRLQL+KS+L SI+
Sbjct: 910  ELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSIT 969

Query: 275  SYWSLYLFLPKNVLKKIQSLFGKFLWGGPINSKPLFKVSWKDCCLPTDEGGL 430
            ++W     LPK  L++I+ +F  FLW GP  +    K++W + C   +EGGL
Sbjct: 970  NFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGL 1021


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/111 (45%), Positives = 65/111 (58%)
 Frame = +2

Query: 98  IAEFPITYLGLPLITSRLNSHHCSSLLSKLYGRTNSWTGRFLSFAGRLQLLKSILMSISS 277
           + + P+ YLGLPL+T RL     S L  ++  R  +WT R+LSFAGRL L+ S+L S  +
Sbjct: 169 LGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMN 228

Query: 278 YWSLYLFLPKNVLKKIQSLFGKFLWGGPINSKPLFKVSWKDCCLPTDEGGL 430
           +W     LP   LK+I S+   FLW GP   +   KVSW D C P  EGGL
Sbjct: 229 FWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGL 279


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