BLASTX nr result
ID: Bupleurum21_contig00032382
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032382 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] 130 1e-28 emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 127 9e-28 emb|CAN70438.1| hypothetical protein VITISV_011899 [Vitis vinifera] 125 4e-27 gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 124 6e-27 gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 124 6e-27 >emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera] Length = 1461 Score = 130 bits (326), Expect = 1e-28 Identities = 60/100 (60%), Positives = 77/100 (77%) Frame = -2 Query: 318 VSQKKYTLDLLKEHGLLNCKPLALPMDSHLKLTPTIGDQLPNPTLYQRLLGQLIYLTVTR 139 +SQ+KYTLD+L E GLL KPL+ PM+ + KL PT+GD L NP+ Y+RL+GQLIYLT+TR Sbjct: 1194 ISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLTITR 1253 Query: 138 PDISFTVHTLSQYMNAPTTVHLQAAKRLLRYLAGSPSQGI 19 P+IS++VH LSQ+M P HL A LLRYL G+P QG+ Sbjct: 1254 PEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGL 1293 >emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana] gi|7267797|emb|CAB81200.1| putative retrotransposon polyprotein [Arabidopsis thaliana] Length = 1203 Score = 127 bits (319), Expect = 9e-28 Identities = 57/106 (53%), Positives = 83/106 (78%) Frame = -2 Query: 318 VSQKKYTLDLLKEHGLLNCKPLALPMDSHLKLTPTIGDQLPNPTLYQRLLGQLIYLTVTR 139 V Q+KY +LL++ GL CKP ++PMD +L LT +G LPN T Y+ L+G+L+YL +TR Sbjct: 772 VCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITR 831 Query: 138 PDISFTVHTLSQYMNAPTTVHLQAAKRLLRYLAGSPSQGILLASSS 1 PDI+F VHTLSQ+++APT +H+QAA ++LRYL G+P QG++ ++SS Sbjct: 832 PDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASS 877 >emb|CAN70438.1| hypothetical protein VITISV_011899 [Vitis vinifera] Length = 314 Score = 125 bits (314), Expect = 4e-27 Identities = 58/100 (58%), Positives = 75/100 (75%) Frame = -2 Query: 318 VSQKKYTLDLLKEHGLLNCKPLALPMDSHLKLTPTIGDQLPNPTLYQRLLGQLIYLTVTR 139 +SQ+KYTLD+L E GLL KPL+ PM+ + KL PT+GD L NP+ Y+RL+ QLIYLT+TR Sbjct: 47 ISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVEQLIYLTITR 106 Query: 138 PDISFTVHTLSQYMNAPTTVHLQAAKRLLRYLAGSPSQGI 19 P+IS++VH LSQ+M P HL LLRYL G+P QG+ Sbjct: 107 PEISYSVHILSQFMQEPRKPHLDVVHHLLRYLKGAPGQGL 146 >gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 1496 Score = 124 bits (312), Expect = 6e-27 Identities = 60/108 (55%), Positives = 77/108 (71%) Frame = -2 Query: 324 FFVSQKKYTLDLLKEHGLLNCKPLALPMDSHLKLTPTIGDQLPNPTLYQRLLGQLIYLTV 145 F +SQ+KY LD++KE GLL CKP A+P+ + KL G NP Y+RL+G+ IYLT+ Sbjct: 1227 FCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTI 1286 Query: 144 TRPDISFTVHTLSQYMNAPTTVHLQAAKRLLRYLAGSPSQGILLASSS 1 TRPD+S+ VH LSQ+M AP H +AA RL+RYL GSP+QGI L S S Sbjct: 1287 TRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDS 1334 >gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1| At2g23330 [Arabidopsis thaliana] gi|110742535|dbj|BAE99183.1| putative retroelement pol polyprotein [Arabidopsis thaliana] Length = 776 Score = 124 bits (312), Expect = 6e-27 Identities = 60/108 (55%), Positives = 77/108 (71%) Frame = -2 Query: 324 FFVSQKKYTLDLLKEHGLLNCKPLALPMDSHLKLTPTIGDQLPNPTLYQRLLGQLIYLTV 145 F +SQ+KY LD++KE GLL CKP A+P+ + KL G NP Y+RL+G+ IYLT+ Sbjct: 507 FCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTI 566 Query: 144 TRPDISFTVHTLSQYMNAPTTVHLQAAKRLLRYLAGSPSQGILLASSS 1 TRPD+S+ VH LSQ+M AP H +AA RL+RYL GSP+QGI L S S Sbjct: 567 TRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDS 614