BLASTX nr result

ID: Bupleurum21_contig00032378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032378
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299799.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002337428.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
gb|ABK95819.1| unknown [Populus trichocarpa]                           88   8e-16
ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kD...    87   1e-15
ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kD...    87   1e-15

>ref|XP_002299799.1| predicted protein [Populus trichocarpa] gi|222847057|gb|EEE84604.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +1

Query: 289 GYHKRNIIRRAVQEELCKILDSGKTSYVPKKGNASVVLFVGLQGSGKTTTCTKYA 453
           G++KR II++A+  ELCKILD GK+S+ PKKG  SVV+FVGLQGSGKTTTCTKYA
Sbjct: 68  GHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTKYA 122



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  MVLAELHGKLTRAIRQLDNETIIDENVLNDCLNEITRALL 146
           MVLA+L G ++RAI+Q+ N TIIDE  LNDCLNEITRALL
Sbjct: 1   MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALL 40


>ref|XP_002337428.1| predicted protein [Populus trichocarpa] gi|222839177|gb|EEE77528.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +1

Query: 289 GYHKRNIIRRAVQEELCKILDSGKTSYVPKKGNASVVLFVGLQGSGKTTTCTKYA 453
           G++KR II++A+  ELCKILD GK+S+ PKKG  SVV+FVGLQGSGKTTTCTKYA
Sbjct: 68  GHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTKYA 122



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  MVLAELHGKLTRAIRQLDNETIIDENVLNDCLNEITRALL 146
           MVLA+L G ++RAI+Q+ N TIIDE  LNDCLNEITRALL
Sbjct: 1   MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALL 40


>gb|ABK95819.1| unknown [Populus trichocarpa]
          Length = 495

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +1

Query: 289 GYHKRNIIRRAVQEELCKILDSGKTSYVPKKGNASVVLFVGLQGSGKTTTCTKYA 453
           G++KR II++A+  ELCKILD GK+S+ PKKG  SVV+FVGLQGSGKTTTCTKYA
Sbjct: 68  GHNKRRIIQQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTKYA 122



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  MVLAELHGKLTRAIRQLDNETIIDENVLNDCLNEITRALL 146
           MVLA+L G ++RAI+Q+ N TIIDE  LNDCLNEITRALL
Sbjct: 1   MVLAQLGGSISRAIQQMSNATIIDEKALNDCLNEITRALL 40


>ref|XP_003545781.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 499

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +1

Query: 289 GYHKRNIIRRAVQEELCKILDSGKTSYVPKKGNASVVLFVGLQGSGKTTTCTKYA 453
           G++KR II++AV  ELCKILD GK S+ PKKG  SVV+FVGLQGSGKTTTCTKYA
Sbjct: 68  GHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYA 122



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +3

Query: 27  MVLAELHGKLTRAIRQLDNETIIDENVLNDCLNEITRALL 146
           MVLAEL G ++RA++Q+ N T+IDE VLNDCLN ITRALL
Sbjct: 1   MVLAELGGSISRALQQMSNATVIDEKVLNDCLNVITRALL 40


>ref|XP_003528309.1| PREDICTED: signal recognition particle 54 kDa protein 2-like
           [Glycine max]
          Length = 495

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/55 (74%), Positives = 47/55 (85%)
 Frame = +1

Query: 289 GYHKRNIIRRAVQEELCKILDSGKTSYVPKKGNASVVLFVGLQGSGKTTTCTKYA 453
           G++KR II++AV  ELCKILD GK S+ PKKG  SVV+FVGLQGSGKTTTCTKYA
Sbjct: 68  GHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYA 122



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 27  MVLAELHGKLTRAIRQLDNETIIDENVLNDCLNEITRALL 146
           MVLAEL G ++RA++Q+ N TIIDE VLNDCLN+ITRALL
Sbjct: 1   MVLAELGGSISRALQQMSNATIIDEKVLNDCLNDITRALL 40


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