BLASTX nr result

ID: Bupleurum21_contig00032364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032364
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   106   2e-21
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...   105   5e-21
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...   102   3e-20
ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-...   102   3e-20

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
 Frame = +3

Query: 3   ENMKLSWILIDPTRPGLMNLSSFSPVSATRHWLSKEVAVKFATVLGR----GNALVECVI 170
           + + LSWILIDPTR    NLSS  PVS  RHWL+ EV V++ATV+G     G+ +V+C I
Sbjct: 175 DTLTLSWILIDPTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGSEVVQCGI 234

Query: 171 VLGCGETEDDDGEVMLQVREVSLEMEDMDGKHLNGKDSILILQNTM 308
           V+ C   E  +    +QVREV+L++EDM+G+HLNGK+S++ILQ  +
Sbjct: 235 VVTCAGKEGGE----MQVREVNLQVEDMEGRHLNGKESLVILQEAL 276


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/105 (50%), Positives = 73/105 (69%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3   ENMKLSWILIDPTRPGLMNLSSFSPVSATRHWLSKEVAVKFATVL---GRGNALVECVIV 173
           ENM LSWILIDP R   MNLSS  PVS  RHWL+ EV VKFAT++   G     VEC ++
Sbjct: 181 ENMTLSWILIDPKRRRAMNLSSGRPVSVQRHWLTGEVVVKFATIMAGDGGEKEFVECGVM 240

Query: 174 LGCGETEDDDGEVMLQVREVSLEMEDMDGKHLNGKDSILILQNTM 308
           + CG+ E  +    ++VRE+S+ MEDM+G++L GK+S++++Q  M
Sbjct: 241 VCCGKKEGGE----MEVREISMGMEDMEGRNLTGKESLVVIQEAM 281


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/105 (55%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3   ENMKLSWILIDPTRPGLMNLSSFSPVSATRHWLSKEVAVKFATVL---GRGNALVECVIV 173
           EN+ LSWILIDP     MNLSS  PVS  RHWL+ EV VKF+ ++   GR    VEC ++
Sbjct: 183 ENITLSWILIDPKGRRAMNLSSERPVSVQRHWLTGEVVVKFSNIMAGDGREKEYVECGVM 242

Query: 174 LGCGETEDDDGEVMLQVREVSLEMEDMDGKHLNGKDSILILQNTM 308
           + CGE E   GEV  +VREVS+ MEDM+GK+L GKD ++ILQ  M
Sbjct: 243 VCCGEKE--GGEV--EVREVSMVMEDMEGKNLTGKDGLVILQEAM 283


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
           sativus]
          Length = 320

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
 Frame = +3

Query: 3   ENMKLSWILIDPTRPGLMNLSSFSPVSATRHWLSKEVAVKFATVLG----RGNA--LVEC 164
           EN+ +SW++IDP +    N+SS  PV   RHWLS E+ V++ TV+G     G+A  +VEC
Sbjct: 174 ENLTVSWVIIDPIKNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVEC 233

Query: 165 VIVLGCGETEDDDGEVMLQVREVSLEMEDMDGKHLNGKDSILILQNTM 308
            +V+ CGE E++  E  + V EVS++M DM+GKHLNGKDS+ IL+  M
Sbjct: 234 AVVVSCGEKEEEGME--MSVTEVSMQMLDMEGKHLNGKDSLGILKEAM 279


>ref|XP_004140262.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 321

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 6/108 (5%)
 Frame = +3

Query: 3   ENMKLSWILIDPTRPGLMNLSSFSPVSATRHWLSKEVAVKFATVLG----RGNA--LVEC 164
           EN+ +SW++IDP +    N+SS  PV   RHWLS E+ V++ TV+G     G+A  +VEC
Sbjct: 174 ENLTVSWVIIDPIKNRAANISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVEC 233

Query: 165 VIVLGCGETEDDDGEVMLQVREVSLEMEDMDGKHLNGKDSILILQNTM 308
            +V+ CGE E++  E  + V EVS++M DM+GKHLNGKDS+ IL+  M
Sbjct: 234 AVVVSCGEKEEEGME--MSVTEVSMQMLDMEGKHLNGKDSLGILKEAM 279