BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032357
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|NP_175477.1| RING/FYVE/PHD zinc finger-containing protein [A...   238   3e-60
dbj|BAH30341.1| hypothetical protein [Arabidopsis thaliana]           236   8e-60
ref|XP_002891584.1| PHD finger family protein [Arabidopsis lyrat...   236   1e-59
gb|AFW73153.1| putative RING zinc finger domain superfamily prot...   194   4e-47

>ref|XP_002298842.1| predicted protein [Populus trichocarpa] gi|222846100|gb|EEE83647.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  239 bits (610), Expect = 1e-60
 Identities = 160/479 (33%), Positives = 239/479 (49%), Gaps = 108/479 (22%)
 Frame = +2

Query: 212  DMKKVAEIVLVLAALGKMRGGDVPSLAEIEMMEDARSKLVDLSQHFPPKDVFPTHAFPSL 391
            +++KVAEIVLVL+A+  MRGG  P+ AE+ +ME+AR KLV++ Q   PKD+    +  ++
Sbjct: 48   EIRKVAEIVLVLSAMAGMRGGKNPTDAEVRLMEEAREKLVEICQDLSPKDLVARDSIGTV 107

Query: 392  IHDLGLQHKS-----GFRPPNLSIAQKLNSTKQKMEDSEKYAPRSAKCTSQTEQ------ 538
            I DLGL  K      GFR   LSI +KL+ +K+KME+S+K+A  SA  T+Q  Q      
Sbjct: 108  IEDLGLNFKLKDQRLGFRGSRLSIKEKLSLSKRKMEESKKFAAPSATYTTQITQPSFGAM 167

Query: 539  ------------------SNISSSAQSHPGGQP---------ASSLGPVSA-GNSTPLPY 634
                              SNIS S+   P   P         +S+L P++     + +  
Sbjct: 168  PESHGPSHAFRVLPSDKPSNISVSSGIFPASLPGHVSAATPASSTLQPLTTEAKISAVSS 227

Query: 635  QLPTSEIRASVSS------------------------GLPSSDHGKHASALALPRAERPY 742
             LP+S++   +SS                         +P++    H+   A   + +P+
Sbjct: 228  GLPSSQLGRDLSSVAFSKVEKTQFKVEGGSNGASYAPQVPANASANHSLVNAPSWSMQPH 287

Query: 743  FTLNGKTS--------------GISYTSKVQADSSGHAQSQSP----------------- 829
               +GK++              G++   + +A  +   Q+  P                 
Sbjct: 288  SASSGKSAPENNMPNHNSAKVEGVADLGRTRATQAARDQTFRPFTPQTPPANLPSIHPPM 347

Query: 830  -----------IHSHNEIGKIVQKLLKPKLPECPIWTPPSRDYMNKALPCQYCKIIINEV 976
                       I++HNEI KIVQKLL+PKLPE P W PPSR+YM  A+ CQ CK+ +NEV
Sbjct: 348  QGVEYVQPPSFINNHNEIAKIVQKLLQPKLPEYPTWIPPSREYMTTAMTCQICKLTVNEV 407

Query: 977  NNVLVCDACEKGYHLNCLQLHKQESIPRAEWQCGKCFSLSNGKPLPPKYGRVMRNSTLLK 1156
              V++CDACE G+H+ C +   Q+ IPR EW C  C +LSNGKPLPPKYGRVMR++T  K
Sbjct: 408  ETVVLCDACESGFHIKCREAINQKGIPRGEWHCRNCMALSNGKPLPPKYGRVMRSATPPK 467

Query: 1157 VSSHEAAVQLSKDKNVQNIVATNNLERMVTNG---NSGTQSAPTGALGNSTHIAPTAQM 1324
              S+ A    S +K  +N+    + ++  TNG   N+G+ S       + + I+   +M
Sbjct: 468  GPSNPAGSHSSLEKKAENVDLKVDQQKS-TNGVQNNAGSGSVNNVESASDSRISGEREM 525


>ref|NP_175477.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
            gi|12322340|gb|AAG51196.1|AC079279_17 hypothetical
            protein [Arabidopsis thaliana]
            gi|332194450|gb|AEE32571.1| RING/FYVE/PHD zinc
            finger-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  238 bits (606), Expect = 3e-60
 Identities = 148/399 (37%), Positives = 205/399 (51%), Gaps = 66/399 (16%)
 Frame = +2

Query: 206  DDDMKKVAEIVLVLAALGKMRGGDVPSLAEIEMMEDARSKLVDLSQHFPPKDVFPTHAFP 385
            D+++ +VAEIVLVL+AL K+RGG  P+  EI++M +A+SKLVD+ Q F PKD+    A  
Sbjct: 38   DEEVNRVAEIVLVLSALRKIRGGKPPTELEIDLMVEAKSKLVDMCQEFTPKDIIGVDAIG 97

Query: 386  SLIHDLGLQHKS-----GFRPPNLSIAQKLNSTKQKMEDSEKYAPRSAKCTSQTEQSNIS 550
            ++I DLG   K      GFR P L+I++KL+  K+KME+ +K    S   TS        
Sbjct: 98   AVIEDLGFNGKLKDQRLGFRAPKLTISEKLSLGKRKMEELKKNPVVSTTSTSP------- 150

Query: 551  SSAQSHPGGQPASSLGPVSAGNSTPLPYQLPTSEIRASVSSGLPSSDHG-KHASALALPR 727
                               A N+  + +Q P SE++AS SS   S  H  + AS +   R
Sbjct: 151  -------------------AVNNVSMAHQWPNSEMKASASSVNASGSHYVREASGITQAR 191

Query: 728  AERPYFTLN----------------------------GKTSGISY----TSKVQADSSG- 808
             ERP F  +                              TS IS+     SKV   SS  
Sbjct: 192  MERPQFKSDLHTGTSQGPAVPAGNYFGNTTTWSAQPHSSTSTISFGTASDSKVPVPSSSR 251

Query: 809  -------------------------HAQSQSPI--HSHNEIGKIVQKLLKPKLPECPIWT 907
                                     + Q+ SP   ++H EI K++ K+L+P+  +  +W 
Sbjct: 252  ISDPSFRPFMSQTPPGAFPGMKGATYGQTSSPFGNNNHAEIAKLIHKVLQPRAKQNLLWN 311

Query: 908  PPSRDYMNKALPCQYCKIIINEVNNVLVCDACEKGYHLNCLQLHKQESIPRAEWQCGKCF 1087
            PPSR+YM+KA+ CQ C+  INE+  VL+CDACEKGYHL CL  H  + +P++EW C +C 
Sbjct: 312  PPSREYMSKAMTCQICQGTINEIETVLICDACEKGYHLKCLHAHNIKGVPKSEWHCSRCV 371

Query: 1088 SLSNGKPLPPKYGRVMRNSTLLKVSSHEAAVQLSKDKNV 1204
             L NGK  PPKYGRVMR++T  K+SS  A VQL  +K V
Sbjct: 372  QLYNGKSFPPKYGRVMRSATTAKMSSSTAEVQLPAEKGV 410


>dbj|BAH30341.1| hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  236 bits (603), Expect = 8e-60
 Identities = 147/399 (36%), Positives = 205/399 (51%), Gaps = 66/399 (16%)
 Frame = +2

Query: 206  DDDMKKVAEIVLVLAALGKMRGGDVPSLAEIEMMEDARSKLVDLSQHFPPKDVFPTHAFP 385
            D+++ +VAEIVLVL+AL K+RGG  P+  EI++M +A+SKLVD+ Q F PKD+    A  
Sbjct: 38   DEEVNRVAEIVLVLSALRKIRGGKPPTELEIDLMVEAKSKLVDMCQEFTPKDIIGVDAIG 97

Query: 386  SLIHDLGLQHKS-----GFRPPNLSIAQKLNSTKQKMEDSEKYAPRSAKCTSQTEQSNIS 550
            ++I DLG   K      GFR P L+I++KL+  K+KME+ +K    S   TS        
Sbjct: 98   AVIEDLGFNGKLKDQRLGFRAPKLTISEKLSLGKRKMEELKKNPVVSTTSTSP------- 150

Query: 551  SSAQSHPGGQPASSLGPVSAGNSTPLPYQLPTSEIRASVSSGLPSSDHG-KHASALALPR 727
                               A N+  + +Q P SE++AS SS   S  H  + AS +   R
Sbjct: 151  -------------------AVNNVSMAHQWPNSEMKASASSVNASGSHYVREASGITQAR 191

Query: 728  AERPYFTLN----------------------------GKTSGISY----TSKVQADSSG- 808
             ERP F  +                              TS IS+     SKV   SS  
Sbjct: 192  MERPQFKSDLHTGTSQGPAVPAGNYFGNTTTWSAQPHSSTSTISFGTASDSKVPVPSSSR 251

Query: 809  -------------------------HAQSQSPI--HSHNEIGKIVQKLLKPKLPECPIWT 907
                                     + Q+ SP   ++H EI K++ K+L+P+  +  +W 
Sbjct: 252  ISDPSFRPFMSQTPPGAFPGMKGATYGQTSSPFGNNNHAEIAKLIHKVLQPRAKQNLLWN 311

Query: 908  PPSRDYMNKALPCQYCKIIINEVNNVLVCDACEKGYHLNCLQLHKQESIPRAEWQCGKCF 1087
            PPSR+YM+KA+ CQ C+  INE+  V++CDACEKGYHL CL  H  + +P++EW C +C 
Sbjct: 312  PPSREYMSKAMTCQICQGTINEIETVVICDACEKGYHLKCLHAHNIKGVPKSEWHCSRCV 371

Query: 1088 SLSNGKPLPPKYGRVMRNSTLLKVSSHEAAVQLSKDKNV 1204
             L NGK  PPKYGRVMR++T  K+SS  A VQL  +K V
Sbjct: 372  QLYNGKSFPPKYGRVMRSATTAKMSSSTAEVQLPAEKGV 410


>ref|XP_002891584.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337426|gb|EFH67843.1| PHD finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 611

 Score =  236 bits (602), Expect = 1e-59
 Identities = 144/370 (38%), Positives = 207/370 (55%), Gaps = 37/370 (10%)
 Frame = +2

Query: 206  DDDMKKVAEIVLVLAALGKMRGGDVPSLAEIEMMEDARSKLVDLSQHFPPKDVFPTHAFP 385
            D+++ +VAEIVLVL+AL K+RGG  P+  EIE+M +A+SKLVD+ Q F PKD+    A  
Sbjct: 36   DEEVNRVAEIVLVLSALRKIRGGKTPTELEIELMVEAKSKLVDMCQEFTPKDIIGIDAIG 95

Query: 386  SLIHDLGLQHKS-----GFRPPNLSIAQKLNSTKQKMEDSEKYAPRSAKCTSQTEQSNIS 550
            ++I DLGL  K      GFR P L+I++KL+  K+KME+ +K    S   TS    SN+S
Sbjct: 96   AVIEDLGLNGKLKDQRLGFRAPKLTISEKLSLGKRKMEELKKAPIVSTTYTSPA--SNVS 153

Query: 551  SSAQSHPGGQPASSLGPVSAGNS----TPLPYQLPT--SEIRASVSSG--LPSSDH-GKH 703
             + Q       AS+    ++G      T    + P   S++    S G  +P+ ++ G  
Sbjct: 154  MAHQWPNSDMKASTSSVNASGREASGITQARMERPQFKSDMHTGTSQGPAVPAGNYFGNT 213

Query: 704  ASALALPRAERP---YFTLNGKTSGISYTSKVQADSSGHAQSQSPI-------------- 832
             S  A P +      + T +     +  +S++   S     SQ+P               
Sbjct: 214  TSWSAQPHSSSSTISFGTASDSKVPVQGSSRISDPSFRPFMSQTPPGPFPGMKGVTYGQT 273

Query: 833  ------HSHNEIGKIVQKLLKPKLPECPIWTPPSRDYMNKALPCQYCKIIINEVNNVLVC 994
                  + H EI K++ K+L+P+  +  +W PPSR+YM+KA+ CQ C+  INEV  VL+C
Sbjct: 274  SSSFGNNHHAEIAKLIHKVLQPQAKQNLLWNPPSREYMSKAMTCQMCQGTINEVETVLIC 333

Query: 995  DACEKGYHLNCLQLHKQESIPRAEWQCGKCFSLSNGKPLPPKYGRVMRNSTLLKVSSHEA 1174
            DACEKGYHL CLQ H  + +P++EW C +C  L NGK  PPKYGRVMR++T  K+SS  A
Sbjct: 334  DACEKGYHLKCLQAHNIKGVPKSEWHCSRCVQLYNGKSFPPKYGRVMRSATTAKMSSSTA 393

Query: 1175 AVQLSKDKNV 1204
             VQL  +K V
Sbjct: 394  EVQLPTEKRV 403


>gb|AFW73153.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
            mays] gi|413938603|gb|AFW73154.1| putative RING zinc
            finger domain superfamily protein isoform 2 [Zea mays]
          Length = 727

 Score =  194 bits (493), Expect = 4e-47
 Identities = 132/399 (33%), Positives = 193/399 (48%), Gaps = 52/399 (13%)
 Frame = +2

Query: 215  MKKVAEIVLVLAALGKMRGGDVPSLAEIEMMEDARSKLVDLSQH--FPPKDVFPTHAFPS 388
            +++VAEIV+VLAA G++RGG  P+ AE  +  +AR  L          PKD+F   A  +
Sbjct: 29   LRRVAEIVMVLAAAGEVRGGMEPTAAERALAAEARETLAAAVAEGAVRPKDLFSVEAVRA 88

Query: 389  LIHDLGLQHKS-----GFRPPNLSIAQKLNSTKQKMEDSEKYAPRSAKCTSQTEQSNISS 553
            ++ DLGL         GFRPP  SIA +L  TK+KME+  K AP   + T    Q+ +SS
Sbjct: 89   VVEDLGLNRAKDPAAMGFRPPKASIADRLMLTKRKMEEV-KEAP--VQSTVSAPQTVVSS 145

Query: 554  SAQSHPGGQPASSLG-----------------------------------PVSAGNSTPL 628
                  G   A+  G                                   PVS  +  P+
Sbjct: 146  GMSDFHGLNGATKFGVGVPRDPPVPSITASAPLTSTSPATLKPPESFPVKPVSNSSVVPV 205

Query: 629  PYQLPTS-EIRASVSSGLPSSDHGK---HASALALPRAERP------YFTLNGKTSGISY 778
             Y  P++ +   +VS  L  +  G    H++   +  + R           N  T  ++ 
Sbjct: 206  LYSGPSNLKSDKNVSGPLNLAHTGATVVHSNKSTVDASARSSVNASNQMVKNQDTKPVTV 265

Query: 779  TSKVQADSSGHAQSQSPIHSHNEIGKIVQKLLKPKLPECPIWTPPSRDYMNKALPCQYCK 958
             +     ++GH  + + I+ HNEI K VQ+ L       P WTPPS DYM+  L CQ CK
Sbjct: 266  QAMAGNPATGHRATPTFIN-HNEIAKNVQQFLHQPANN-PSWTPPSTDYMHSRLSCQICK 323

Query: 959  IIINEVNNVLVCDACEKGYHLNCLQLHKQESIPRAEWQCGKCFSLSNGKPLPPKYGRVMR 1138
            ++I   +++LVCDACE+G HL CLQ +  + +P+AEW C  C + S GKPLPPKYG+V R
Sbjct: 324  VVIIGTDSLLVCDACERGVHLKCLQQYGNKGVPKAEWHCSACLTQSKGKPLPPKYGKVTR 383

Query: 1139 NSTLLKVSSHEAAVQLSKDKNVQNIVATNNLERMVTNGN 1255
                 K +      QLS   + +N+ +  N +++  NGN
Sbjct: 384  TVVASKAAPPGGGAQLSLQGSAENMASKENHQKLAANGN 422