BLASTX nr result

ID: Bupleurum21_contig00032355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032355
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]   210   8e-53
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   204   5e-51
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]   201   4e-50
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   186   2e-45
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]       184   7e-45

>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score =  210 bits (535), Expect = 8e-53
 Identities = 98/169 (57%), Positives = 133/169 (78%)
 Frame = +1

Query: 1    FVSQKGYARQLIEKFGMKEAKDMATPMEQNLKLMKDGSKPVKDVRRYRQLVGSLIYLTIT 180
            F+ Q+ YA+ L++KFGM E K ++TPME N K+ +   K +KD   YRQLVGSL+YLT+T
Sbjct: 700  FLCQQKYAKDLLKKFGMLECKSISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLVYLTLT 759

Query: 181  RPEICFAVGVISQFMENPQVSHLDAAKRILRYIKGTLEYGLLYTKGNEVLLSGFTDADWA 360
            RP+I +AVGV+S++M+NP+  HL+A +RILR++KGT++YGLLY KG +  L G+ DAD+A
Sbjct: 760  RPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDCKLVGYCDADYA 819

Query: 361  GNINDRRSTTGYCFSMGSSVISWCSKKQPNVTLSSTEAEYVAATMASQE 507
            G+ + RRSTTGY F +GS  ISWCSK+QP V+L +TEAEY AA MA+QE
Sbjct: 820  GDHDTRRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEYRAAAMAAQE 868


>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/169 (56%), Positives = 131/169 (77%)
 Frame = +1

Query: 1    FVSQKGYARQLIEKFGMKEAKDMATPMEQNLKLMKDGSKPVKDVRRYRQLVGSLIYLTIT 180
            F+ Q+ YA+ L++KFGM E K ++TPME N K+ +   K +KD   YRQLVGSL+YLT+T
Sbjct: 1027 FLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLTLT 1086

Query: 181  RPEICFAVGVISQFMENPQVSHLDAAKRILRYIKGTLEYGLLYTKGNEVLLSGFTDADWA 360
             P+I +AVGV+S++M+NP+  HL+A +RILR++KGT++YGLLY K  +  L G+ DAD+A
Sbjct: 1087 XPDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADYA 1146

Query: 361  GNINDRRSTTGYCFSMGSSVISWCSKKQPNVTLSSTEAEYVAATMASQE 507
            G+ + R STTGY F +GS  ISWCSK+QP V+LS+TEAEY AA MA+QE
Sbjct: 1147 GDHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQE 1195


>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
          Length = 1161

 Score =  201 bits (512), Expect = 4e-50
 Identities = 95/169 (56%), Positives = 129/169 (76%)
 Frame = +1

Query: 1    FVSQKGYARQLIEKFGMKEAKDMATPMEQNLKLMKDGSKPVKDVRRYRQLVGSLIYLTIT 180
            F+ Q+ YA+ L++KFGM E K ++TPME N K+ +   K +KD   YRQLVGSL+YLT T
Sbjct: 954  FLCQQKYAKDLLKKFGMLECKPISTPMEPNAKMCEHEGKDLKDATMYRQLVGSLLYLTFT 1013

Query: 181  RPEICFAVGVISQFMENPQVSHLDAAKRILRYIKGTLEYGLLYTKGNEVLLSGFTDADWA 360
            R +I +AVGV+S++M+NP+  HL+A +RILR++KGT++YGLLY KG +  L G+ DAD+ 
Sbjct: 1014 RTDISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDYKLVGYCDADYV 1073

Query: 361  GNINDRRSTTGYCFSMGSSVISWCSKKQPNVTLSSTEAEYVAATMASQE 507
            G+ + RRSTTGY F +GS  ISWCSK+QP V+LS+ E EY AA MA+QE
Sbjct: 1074 GDHDTRRSTTGYVFMLGSRAISWCSKRQPTVSLSTMEXEYRAAPMAAQE 1122


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/165 (55%), Positives = 117/165 (70%)
 Frame = +1

Query: 4    VSQKGYARQLIEKFGMKEAKDMATPMEQNLKLMKDGSKPVKDVRRYRQLVGSLIYLTITR 183
            +SQ+ YA  L++KF M+ A    TPM+ NLKL KD      D   YR LVGSL+YLT TR
Sbjct: 1018 ISQQKYAHDLLKKFRMENASPCNTPMDANLKLCKDDIGEAVDPSLYRSLVGSLMYLTATR 1077

Query: 184  PEICFAVGVISQFMENPQVSHLDAAKRILRYIKGTLEYGLLYTKGNEVLLSGFTDADWAG 363
            P+I F V ++S+FM NP+ SH +A KR+LRYI GT+ +G+ Y K +E +L GF D+DW G
Sbjct: 1078 PDILFVVSMLSRFMTNPKRSHWEAGKRVLRYILGTINFGIYYKKVSESVLFGFCDSDWGG 1137

Query: 364  NINDRRSTTGYCFSMGSSVISWCSKKQPNVTLSSTEAEYVAATMA 498
            N++D RST+GY FSMGS V SW SKKQ  VTLS+TEAEY++   A
Sbjct: 1138 NVDDHRSTSGYVFSMGSGVFSWTSKKQSVVTLSTTEAEYISLAAA 1182


>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1140

 Score =  184 bits (467), Expect = 7e-45
 Identities = 87/166 (52%), Positives = 122/166 (73%)
 Frame = +1

Query: 1    FVSQKGYARQLIEKFGMKEAKDMATPMEQNLKLMKDGSKPVKDVRRYRQLVGSLIYLTIT 180
            FVSQK YA ++++KF + + K ++TP  Q  KLMK+    + D   YR L+GSL+YL+ T
Sbjct: 870  FVSQKKYATEILKKFCLDKCKPVSTPAVQGEKLMKEDESGLVDASIYRSLIGSLLYLSAT 929

Query: 181  RPEICFAVGVISQFMENPQVSHLDAAKRILRYIKGTLEYGLLYTKGNEVLLSGFTDADWA 360
            RP+I +A  V+S+FM  P  +HL AAKRILRYI+GT++YG+ Y +   + L GFTD+DWA
Sbjct: 930  RPDIMYATSVLSRFMHLPTKTHLKAAKRILRYIRGTIDYGVFYKRTTSMKLLGFTDSDWA 989

Query: 361  GNINDRRSTTGYCFSMGSSVISWCSKKQPNVTLSSTEAEYVAATMA 498
            G+ +D +ST+GYCF++GS VI WC+KKQ +V  S+ EAEYVAA+ A
Sbjct: 990  GSQDDMKSTSGYCFTLGSGVICWCTKKQGSVAQSTAEAEYVAASGA 1035


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