BLASTX nr result

ID: Bupleurum21_contig00032337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032337
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331515.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_002332619.1| predicted protein [Populus trichocarpa] gi|2...   286   4e-75
ref|XP_002332618.1| predicted protein [Populus trichocarpa] gi|2...   285   1e-74
ref|XP_002331513.1| predicted protein [Populus trichocarpa] gi|2...   284   2e-74
ref|XP_003632954.1| PREDICTED: probable F-box protein At4g22030-...   281   2e-73

>ref|XP_002331515.1| predicted protein [Populus trichocarpa] gi|222873739|gb|EEF10870.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  288 bits (736), Expect = 2e-75
 Identities = 155/282 (54%), Positives = 183/282 (64%)
 Frame = +2

Query: 101 SNKNELVIGKLYAIKETVSDRVEMHRNICEQRKNWXXXXXXXXXXXXXXXXXXXXXXXXX 280
           S+ + +V+ KLYA+ E V+DR+EMH+NI EQR NW                         
Sbjct: 10  SSSDPVVVAKLYAVMEAVADRIEMHKNIGEQRDNWNHLLLSSIHAMTLTAATMCGLAAAS 69

Query: 281 XXDGAPLVALKVASTLLYMGATGMVIIMNKIQPSQLAEEQRNATRLFRHLQKHIQTIIDI 460
              G PL  LKV+ST+LY+ ATGM+ IMNKIQPSQLAEEQRNA RLF+ L   IQT++ +
Sbjct: 70  A-SGEPLAGLKVSSTILYLAATGMLAIMNKIQPSQLAEEQRNAARLFKQLHGQIQTLLSV 128

Query: 461 GSPNVSDVEETMNRVLALDRAYPLPLLGVMLEKFPSVVEAAVWWPXXXXXXXXXXXSNNI 640
           GSP VSDV E    VLALD+AYPLPLLG MLE++PS VE AVWWP               
Sbjct: 129 GSPTVSDVNEATENVLALDKAYPLPLLGAMLERYPSSVEPAVWWPQQRRKQAKGIG---- 184

Query: 641 SHHGVEKSYGNGWDEELENEMREIASVLRKNDEADYLRLGGIALKINKVLAICGPLLTIL 820
                 K  GNGW+ ELE+EMREI  VL++ D+ADYLRL G ALK +KVLA  GPLLT L
Sbjct: 185 -----RKIEGNGWNRELEDEMREIVGVLKRKDKADYLRLSGKALKAHKVLAFSGPLLTGL 239

Query: 821 GAIGSGFVGFDSFPGNSWAVMFGVVGGALASVVNTMEHGGQI 946
           GA+GS FVG      N WAV+ GV GGALASVVN MEHGGQ+
Sbjct: 240 GALGSAFVG----TTNPWAVILGVAGGALASVVNAMEHGGQV 277


>ref|XP_002332619.1| predicted protein [Populus trichocarpa] gi|222832820|gb|EEE71297.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  286 bits (733), Expect = 4e-75
 Identities = 154/282 (54%), Positives = 183/282 (64%)
 Frame = +2

Query: 101 SNKNELVIGKLYAIKETVSDRVEMHRNICEQRKNWXXXXXXXXXXXXXXXXXXXXXXXXX 280
           S+ + +V+ KLYA+ E V+DR+EMH+NI EQR NW                         
Sbjct: 10  SSSDPVVVAKLYAVMEAVADRIEMHKNIGEQRDNWNHLLLSSIHAMTLTAATMCGLAAAS 69

Query: 281 XXDGAPLVALKVASTLLYMGATGMVIIMNKIQPSQLAEEQRNATRLFRHLQKHIQTIIDI 460
              G PL  LKV+ST+LY+ ATGM+ IMNKIQPSQLAEEQRNA RLF+ L   IQT++ +
Sbjct: 70  A-SGEPLAGLKVSSTILYLAATGMLAIMNKIQPSQLAEEQRNAARLFKQLHGQIQTLLSV 128

Query: 461 GSPNVSDVEETMNRVLALDRAYPLPLLGVMLEKFPSVVEAAVWWPXXXXXXXXXXXSNNI 640
           GSP VSDV E    VLALD+AYPLPLLG MLE++PS VE AVWWP               
Sbjct: 129 GSPTVSDVNEATENVLALDKAYPLPLLGAMLERYPSSVEPAVWWPQQRRKQAKGLG---- 184

Query: 641 SHHGVEKSYGNGWDEELENEMREIASVLRKNDEADYLRLGGIALKINKVLAICGPLLTIL 820
                 K  GNGW+ ELE+EMREI  VL++ D+ADYLRL G ALK +K+LA  GPLLT L
Sbjct: 185 -----RKIEGNGWNRELEDEMREIVGVLKRKDKADYLRLSGKALKAHKMLAFSGPLLTGL 239

Query: 821 GAIGSGFVGFDSFPGNSWAVMFGVVGGALASVVNTMEHGGQI 946
           GA+GS FVG      N WAV+ GV GGALASVVN MEHGGQ+
Sbjct: 240 GALGSAFVG----TTNPWAVILGVAGGALASVVNAMEHGGQV 277


>ref|XP_002332618.1| predicted protein [Populus trichocarpa] gi|222832819|gb|EEE71296.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  285 bits (729), Expect = 1e-74
 Identities = 153/282 (54%), Positives = 183/282 (64%)
 Frame = +2

Query: 101 SNKNELVIGKLYAIKETVSDRVEMHRNICEQRKNWXXXXXXXXXXXXXXXXXXXXXXXXX 280
           S+ + +V+ KL+A+ E V+DR+EMH+NI EQR NW                         
Sbjct: 10  SSSDPVVVAKLHALMEAVADRIEMHKNIGEQRDNWNHLLLSSIHAMTLTAATMCGLAAAS 69

Query: 281 XXDGAPLVALKVASTLLYMGATGMVIIMNKIQPSQLAEEQRNATRLFRHLQKHIQTIIDI 460
              G PL  LKV+ST+LY+ ATGM+ IMNKIQPSQLAEEQRNA RLF+ L   IQT++ +
Sbjct: 70  A-SGEPLAGLKVSSTILYLAATGMLAIMNKIQPSQLAEEQRNAARLFKQLHGQIQTLLSV 128

Query: 461 GSPNVSDVEETMNRVLALDRAYPLPLLGVMLEKFPSVVEAAVWWPXXXXXXXXXXXSNNI 640
           GSP VSDV E    VLALD+AYPLPLLG MLE++PS VE AVWWP               
Sbjct: 129 GSPTVSDVNEATENVLALDKAYPLPLLGAMLERYPSSVEPAVWWPQQRRKQAKGLG---- 184

Query: 641 SHHGVEKSYGNGWDEELENEMREIASVLRKNDEADYLRLGGIALKINKVLAICGPLLTIL 820
                 K  GNGW+ ELE+EMREI  VL++ D+ADYLRL G ALK +K+LA  GPLLT L
Sbjct: 185 -----RKIEGNGWNRELEDEMREIVGVLKRKDKADYLRLSGKALKAHKMLAFSGPLLTGL 239

Query: 821 GAIGSGFVGFDSFPGNSWAVMFGVVGGALASVVNTMEHGGQI 946
           GA+GS FVG      N WAV+ GV GGALASVVN MEHGGQ+
Sbjct: 240 GALGSAFVG----TSNPWAVILGVAGGALASVVNAMEHGGQV 277


>ref|XP_002331513.1| predicted protein [Populus trichocarpa] gi|222873737|gb|EEF10868.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score =  284 bits (727), Expect = 2e-74
 Identities = 153/282 (54%), Positives = 183/282 (64%)
 Frame = +2

Query: 101 SNKNELVIGKLYAIKETVSDRVEMHRNICEQRKNWXXXXXXXXXXXXXXXXXXXXXXXXX 280
           S+ + +V+ KL+A+ E V+DR+EMH+NI EQR NW                         
Sbjct: 10  SSSDPVVVAKLHALMEAVADRIEMHKNIGEQRDNWNHLLLSSIHAMTLTAATMCGLAAAS 69

Query: 281 XXDGAPLVALKVASTLLYMGATGMVIIMNKIQPSQLAEEQRNATRLFRHLQKHIQTIIDI 460
              G PL  LKV+ST+LY+ ATGM+ IMNKIQPSQLAEEQRNA RLF+ L   IQT++ +
Sbjct: 70  A-SGEPLAGLKVSSTILYLAATGMLAIMNKIQPSQLAEEQRNAARLFKQLHGQIQTLLSV 128

Query: 461 GSPNVSDVEETMNRVLALDRAYPLPLLGVMLEKFPSVVEAAVWWPXXXXXXXXXXXSNNI 640
           GSP VSDV E    VLALD+AYPLPLLG MLE++PS VE AVWWP               
Sbjct: 129 GSPTVSDVNEATENVLALDKAYPLPLLGAMLERYPSSVEPAVWWPQQRRKQAKGLG---- 184

Query: 641 SHHGVEKSYGNGWDEELENEMREIASVLRKNDEADYLRLGGIALKINKVLAICGPLLTIL 820
                 K  GNGW+ ELE+EMREI  VL++ D+ADYLRL G ALK +K+LA  GPLLT L
Sbjct: 185 -----RKIEGNGWNRELEDEMREIVGVLKRKDKADYLRLSGKALKAHKMLAFSGPLLTGL 239

Query: 821 GAIGSGFVGFDSFPGNSWAVMFGVVGGALASVVNTMEHGGQI 946
           GA+GS FVG      N WAV+ GV GGALASVVN MEHGGQ+
Sbjct: 240 GALGSAFVG----TTNPWAVILGVAGGALASVVNAMEHGGQV 277


>ref|XP_003632954.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 428

 Score =  281 bits (719), Expect = 2e-73
 Identities = 151/285 (52%), Positives = 183/285 (64%)
 Frame = +2

Query: 92  SLNSNKNELVIGKLYAIKETVSDRVEMHRNICEQRKNWXXXXXXXXXXXXXXXXXXXXXX 271
           S+++  + +VI KL+AI E V+DRVEMH+NI EQR NW                      
Sbjct: 81  SVSNVSDPMVIAKLHAIMEAVADRVEMHKNIGEQRDNWNHLLLTSINAITLTAATMAGIA 140

Query: 272 XXXXXDGAPLVALKVASTLLYMGATGMVIIMNKIQPSQLAEEQRNATRLFRHLQKHIQTI 451
                 G PLVALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ L   IQ  
Sbjct: 141 ATSV--GGPLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAVRLFKQLHGQIQRT 198

Query: 452 IDIGSPNVSDVEETMNRVLALDRAYPLPLLGVMLEKFPSVVEAAVWWPXXXXXXXXXXXS 631
           +  G+P  +DVEE M +VLALD+AYPLPLLG ML+KFP  VE AVWWP            
Sbjct: 199 LSCGTPTSTDVEEAMEKVLALDKAYPLPLLGAMLDKFPKTVEPAVWWP-----------Q 247

Query: 632 NNISHHGVEKSYGNGWDEELENEMREIASVLRKNDEADYLRLGGIALKINKVLAICGPLL 811
           N        ++ GNGW  ELE EMRE+  VL++ D  DYLRLG IALK+NK+LAI GPLL
Sbjct: 248 NKQRQRHSGRTDGNGWSMELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLL 307

Query: 812 TILGAIGSGFVGFDSFPGNSWAVMFGVVGGALASVVNTMEHGGQI 946
           T L A G+ FVG    P   WA   GVV GA+ASVVNTMEHGGQ+
Sbjct: 308 TGLAACGTAFVGSSHGP---WAATLGVVAGAMASVVNTMEHGGQV 349


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