BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032273
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]   203   1e-50
ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   124   6e-27
ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27

>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/173 (58%), Positives = 132/173 (76%), Gaps = 2/173 (1%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           ELFS F LM+ +G+LPD+YL+PTILKACSA+ L R GKM+HG+++RK + SD  + NALI
Sbjct: 166 ELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALI 225

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLI 155
             Y+NCG L  +RSVF  MQ RDVVSWTAL+SAYM+EGL +EA+  FH M+L GVKPDLI
Sbjct: 226 HFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLI 285

Query: 154 SWNALVSGYARNGDIHQSVCCLEEMQGNGVRPEV--FPGMQ*FQEILGCVRNG 2
           SW+AL+SG+ARNG+I  ++  LEEM   G++P V  + G+     I GCV+NG
Sbjct: 286 SWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGI-----ISGCVQNG 333



 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/139 (34%), Positives = 83/139 (59%)
 Frame = -2

Query: 469 PDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLYANCGKLRYARSV 290
           P+   + +IL AC+ ++ LR GK IH    +  +  +  +  ++ID+Y+ CG   YA  V
Sbjct: 352 PNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411

Query: 289 FDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWNALVSGYARNGDI 110
           F + +N++   W  +++AY++EG + +A     SM+  G KPD+I++N ++SG+ARNG  
Sbjct: 412 FXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLK 471

Query: 109 HQSVCCLEEMQGNGVRPEV 53
            Q+   L EM   G++P V
Sbjct: 472 TQAXELLSEMVQMGLKPNV 490



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
 Frame = -2

Query: 514  ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGS-DAVLSNAL 338
            E   +F  M+ +GL P       +  AC  +  +R G+ +HGY  + +L      + +AL
Sbjct: 621  EALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSAL 680

Query: 337  IDLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDL 158
            ID+YA CG +  A+SVFD    +DV  W A++SA+   G+   A   F  M+L G+ PD 
Sbjct: 681  IDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDH 740

Query: 157  ISWNALVSGYARNGDIHQ 104
            I++ +L+S  AR+G + +
Sbjct: 741  ITFVSLLSACARDGLVEE 758



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/110 (33%), Positives = 58/110 (52%)
 Frame = -2

Query: 469 PDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLYANCGKLRYARSV 290
           P+   +   L AC+ + L   GK IHGY +R     +  +S+AL+D+YA C  +  A  V
Sbjct: 535 PNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKV 594

Query: 289 FDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWNAL 140
           F  +  R+ VSW AL++ Y++     EA   F  M   G++P  I++  L
Sbjct: 595 FFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMIL 644


>ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 406

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/173 (57%), Positives = 131/173 (75%), Gaps = 2/173 (1%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           ELF+ F  M+ +G+LPD+YL+PTILKACS  Q+++TGKM HGY +RK + SD V+ NAL+
Sbjct: 151 ELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALM 210

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLI 155
           D Y NCG L  + +VFD M  +DVVSWTALVSAY++EGL+NEA + FHSM+ SG+KPDLI
Sbjct: 211 DFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLKPDLI 270

Query: 154 SWNALVSGYARNGDIHQSVCCLEEMQGNGVRPEV--FPGMQ*FQEILGCVRNG 2
           SWNALVSG+AR G+ + ++  LE MQ  G+RP V  + G+     I GCV+NG
Sbjct: 271 SWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNGV-----ISGCVQNG 318


>ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 677

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/173 (57%), Positives = 131/173 (75%), Gaps = 2/173 (1%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           ELF+ F  M+ +G+LPD+YL+PTILKACS  Q+++TGKM HGY +RK + SD V+ NAL+
Sbjct: 151 ELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALM 210

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLI 155
           D Y NCG L  + +VFD M  +DVVSWTALVSAY++EGL+NEA + FHSM+ SG+KPDLI
Sbjct: 211 DFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLKPDLI 270

Query: 154 SWNALVSGYARNGDIHQSVCCLEEMQGNGVRPEV--FPGMQ*FQEILGCVRNG 2
           SWNALVSG+AR G+ + ++  LE MQ  G+RP V  + G+     I GCV+NG
Sbjct: 271 SWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNGV-----ISGCVQNG 318



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 41/139 (29%), Positives = 85/139 (61%)
 Frame = -2

Query: 469 PDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLYANCGKLRYARSV 290
           P+   + +IL AC+ ++ L  G+ +H Y ++ EL ++  +  +L+D+Y+ CG+   A  +
Sbjct: 337 PNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEI 396

Query: 289 FDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWNALVSGYARNGDI 110
           F + + +++  W  +++ YM++G  + A + F SM+  G+KPD++++N L++GYA+NG  
Sbjct: 397 FAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQK 456

Query: 109 HQSVCCLEEMQGNGVRPEV 53
            ++   L +M    + P V
Sbjct: 457 VEAYELLSDMLQENLVPNV 475



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/132 (31%), Positives = 73/132 (55%)
 Frame = -2

Query: 505 SVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLY 326
           S+    I   ++P+   L   L AC+++ LL  GK IHGY++R    ++  +S+ALI++Y
Sbjct: 506 SLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYMLRNYFVNNYFISSALINMY 565

Query: 325 ANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWN 146
           A CG +  A  VF  ++NR+VV W AL++  +       A + F  M + G+KP   +++
Sbjct: 566 AKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFS 625

Query: 145 ALVSGYARNGDI 110
            L+   +   D+
Sbjct: 626 ILLPALSERADL 637


>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355517031|gb|AES98654.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/155 (35%), Positives = 98/155 (63%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           E+  +F  M+ DG+LPD +LLP +L+AC   + L TG++IH  ++R+ +     L N+++
Sbjct: 166 EVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIM 225

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLI 155
            +YA CG++  A+ +FD M  RD V+W A++S +   G I +A+  F +M+  GV+P L+
Sbjct: 226 AVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLV 285

Query: 154 SWNALVSGYARNGDIHQSVCCLEEMQGNGVRPEVF 50
           +WN L+S Y + G    ++  + +M+  G+ P+V+
Sbjct: 286 TWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVY 320



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/141 (30%), Positives = 79/141 (56%)
 Frame = -2

Query: 490 MICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLYANCGK 311
           M   G+  +   + +   AC+A++ L  G  IH   V+  L  + ++ N+LID+Y  CG 
Sbjct: 345 MFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGD 404

Query: 310 LRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWNALVSG 131
           L+ A+ +FD M  RDV SW +++  Y   G   +A + F  M+ S   P++I+WN +++G
Sbjct: 405 LKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITG 464

Query: 130 YARNGDIHQSVCCLEEMQGNG 68
           Y ++G   Q++   + ++ +G
Sbjct: 465 YMQSGAEDQALDLFKSIEKDG 485



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 39/124 (31%), Positives = 74/124 (59%)
 Frame = -2

Query: 475 LLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALIDLYANCGKLRYAR 296
           +LP+   + +IL  C+ +   +  K IH + VR+ L S+  +SN LID YA  G L Y++
Sbjct: 522 ILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSK 581

Query: 295 SVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLISWNALVSGYARNG 116
           ++F+E+  +D VSW +++S+Y+  G    A D F+ M+  G++P+  ++ +++  Y   G
Sbjct: 582 NIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAG 641

Query: 115 DIHQ 104
            + +
Sbjct: 642 MVDE 645


>ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
           gi|449496662|ref|XP_004160192.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g59600-like [Cucumis sativus]
          Length = 547

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/154 (38%), Positives = 96/154 (62%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           E  SVF  +   GL P  Y++P++LKAC  +    TG+ +H  I++  L SDA + +ALI
Sbjct: 112 EALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALI 171

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKPDLI 155
           D+YA  G++  AR VF+ M  +D+V+  A+VS Y   GL  EA +    M++ G+KP+L+
Sbjct: 172 DMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLV 231

Query: 154 SWNALVSGYARNGDIHQSVCCLEEMQGNGVRPEV 53
           +WN LV+G+++ G+        +EM+ NG+ P+V
Sbjct: 232 TWNTLVTGFSQIGEEEMVRELFKEMEANGIEPDV 265



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
 Frame = -2

Query: 514 ELFSVFGLMICDGLLPDRYLLPTILKACSAVQLLRTGKMIHGYIVRKELGSDAVLSNALI 335
           E F  F  M+  G  P    + ++L AC++V   R GK IHG+ +   +  D  +  AL+
Sbjct: 283 EAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALV 342

Query: 334 DLYANCGKLRYARSVFDEMQNRDVVSWTALVSAYMDEGLINEAEDTFHSMKLSGVKP-DL 158
           D+YA CG    A+ +F  M  R+  +W +++  Y + G  NEA + FH MK    K  D 
Sbjct: 343 DMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDH 402

Query: 157 ISWNALVSGYARNGDIHQSVCCLEEMQGN-GVRPEV 53
           +++ A+++  A  G +       + MQ   G+ P V
Sbjct: 403 LTFTAILTACAHAGLVDLGRSLFQLMQSKYGIVPRV 438