BLASTX nr result

ID: Bupleurum21_contig00032256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032256
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002335114.1| predicted protein [Populus trichocarpa] gi|2...   415   e-114
ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|2...   412   e-113
ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glyc...   400   e-109
ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Viti...   396   e-108

>ref|XP_002335114.1| predicted protein [Populus trichocarpa]
            gi|224137804|ref|XP_002326444.1| predicted protein
            [Populus trichocarpa] gi|222832896|gb|EEE71373.1|
            predicted protein [Populus trichocarpa]
            gi|222833766|gb|EEE72243.1| predicted protein [Populus
            trichocarpa]
          Length = 496

 Score =  415 bits (1067), Expect = e-114
 Identities = 199/276 (72%), Positives = 233/276 (84%), Gaps = 2/276 (0%)
 Frame = +2

Query: 2    GFLIDLSASSDLE--YIYEFVTLRDILLDSNFRGGAIQVVNSLRTSIDNCYITHFTTTGI 175
            G+LIDLSASS     Y YE++T++D++LD  FRGG I V+NSLRTSIDNCYITHF T GI
Sbjct: 177  GYLIDLSASSSSSSSYNYEYITIKDLMLDCKFRGGGISVINSLRTSIDNCYITHFNTEGI 236

Query: 176  KVQGGHETYIRNCYLGQHITAGADPGEKDFSGTAIILGGNDNAVTDVVIFSAATGIVIEG 355
             VQ GHETYIRN +LGQHITAG DPGE+ FSGTAI L GNDNAVTDVVIFSAA G+++ G
Sbjct: 237  SVQNGHETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSG 296

Query: 356  QANTLSGVHCYNKATSFGGVGVYIKVPGLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFL 535
            QANTLSGVHCYNKAT FGG G+Y+K+P LTQTRIVNCYLDYTGIVAEDPVQL ISS FFL
Sbjct: 297  QANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFL 356

Query: 536  GDAFVLLRSINGVANGVNIVDNMFSGSDKGIDIVQLDERNCKFKDVKQVIVDRNNAKGMS 715
            GDA++LL+SING+A G+NIVDNMF+GSDKGI+IVQLD+    FK + QV+VDRNN +GM+
Sbjct: 357  GDAYILLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMN 416

Query: 716  VKSTIARGTVEGNDSSWKVDLSRELLFPNLVKSVQY 823
            +K+T ARG+ +GN +SW VD S  LLFPNL+  VQY
Sbjct: 417  LKATAARGSAQGNGTSWTVDFSPVLLFPNLINHVQY 452


>ref|XP_002337878.1| predicted protein [Populus trichocarpa] gi|222869958|gb|EEF07089.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  412 bits (1060), Expect = e-113
 Identities = 198/276 (71%), Positives = 232/276 (84%), Gaps = 2/276 (0%)
 Frame = +2

Query: 2   GFLIDLSASSDLE--YIYEFVTLRDILLDSNFRGGAIQVVNSLRTSIDNCYITHFTTTGI 175
           G+LIDLSASS     Y YE++T++D++LD  FRGG I V+NSLRTSIDNCYITHF T GI
Sbjct: 17  GYLIDLSASSSSSSSYNYEYITIKDLMLDCKFRGGGISVINSLRTSIDNCYITHFNTEGI 76

Query: 176 KVQGGHETYIRNCYLGQHITAGADPGEKDFSGTAIILGGNDNAVTDVVIFSAATGIVIEG 355
            VQ GHETYIRN +LGQHITAG DPGE+ FSGTAI L GNDNAVTDVVIFSAA G+++ G
Sbjct: 77  SVQNGHETYIRNSFLGQHITAGGDPGERKFSGTAINLMGNDNAVTDVVIFSAAIGVMVSG 136

Query: 356 QANTLSGVHCYNKATSFGGVGVYIKVPGLTQTRIVNCYLDYTGIVAEDPVQLHISSSFFL 535
           QANTLSGVHCYN AT FGG G+Y+K+P LTQTRIVNCYLDYTGIVAEDPVQL ISS FFL
Sbjct: 137 QANTLSGVHCYNLATGFGGTGIYLKLPSLTQTRIVNCYLDYTGIVAEDPVQLTISSCFFL 196

Query: 536 GDAFVLLRSINGVANGVNIVDNMFSGSDKGIDIVQLDERNCKFKDVKQVIVDRNNAKGMS 715
           GDA++LL+SING+A G+NIVDNMF+GSDKGI+IVQLD+    FK + QV+VDRNN +GM+
Sbjct: 197 GDAYILLKSINGLAKGINIVDNMFAGSDKGIEIVQLDQSKGPFKKIDQVVVDRNNVEGMN 256

Query: 716 VKSTIARGTVEGNDSSWKVDLSRELLFPNLVKSVQY 823
           +K+T ARG+ +GN +SW VD S  LLFPNL+  VQY
Sbjct: 257 LKATAARGSAQGNGTSWTVDFSPVLLFPNLINHVQY 292


>ref|XP_002303344.1| predicted protein [Populus trichocarpa] gi|222840776|gb|EEE78323.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score =  407 bits (1047), Expect = e-111
 Identities = 193/277 (69%), Positives = 234/277 (84%), Gaps = 3/277 (1%)
 Frame = +2

Query: 2   GFLIDLSASSDLE---YIYEFVTLRDILLDSNFRGGAIQVVNSLRTSIDNCYITHFTTTG 172
           G+LIDLSASS      Y YE++T++D++LD ++RGG I V+NSLRTSIDNCYI HF T G
Sbjct: 169 GYLIDLSASSSSSSSSYNYEYITIKDLMLDCSYRGGGISVINSLRTSIDNCYIAHFNTEG 228

Query: 173 IKVQGGHETYIRNCYLGQHITAGADPGEKDFSGTAIILGGNDNAVTDVVIFSAATGIVIE 352
           I VQ GHETYIRN +LGQHITAG DPGE++FSGTAI L GNDNAVTDVVIFSAA G++I 
Sbjct: 229 ILVQDGHETYIRNSFLGQHITAGGDPGERNFSGTAINLMGNDNAVTDVVIFSAAIGVMIS 288

Query: 353 GQANTLSGVHCYNKATSFGGVGVYIKVPGLTQTRIVNCYLDYTGIVAEDPVQLHISSSFF 532
           GQANTLSGVHCYNKAT FGG G+Y+K+P LTQTRI+NCYLDY+GIVAEDPVQL ISSSFF
Sbjct: 289 GQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRILNCYLDYSGIVAEDPVQLTISSSFF 348

Query: 533 LGDAFVLLRSINGVANGVNIVDNMFSGSDKGIDIVQLDERNCKFKDVKQVIVDRNNAKGM 712
           LGDA++L +S+ G+A G+NIVDNMFSGS+KGI+IVQLD+    FK + QV+VDRNN  GM
Sbjct: 349 LGDAYILFKSVKGLAKGINIVDNMFSGSNKGIEIVQLDQSKGPFKQIDQVVVDRNNVNGM 408

Query: 713 SVKSTIARGTVEGNDSSWKVDLSRELLFPNLVKSVQY 823
           ++K+T+A+G+V+GN +SW +D S  LLFPNL+  VQY
Sbjct: 409 NLKATVAKGSVQGNGTSWTIDFSPVLLFPNLIDHVQY 445


>ref|XP_003534867.1| PREDICTED: polygalacturonase QRT3-like [Glycine max]
          Length = 472

 Score =  400 bits (1027), Expect = e-109
 Identities = 191/279 (68%), Positives = 234/279 (83%), Gaps = 5/279 (1%)
 Frame = +2

Query: 2   GFLIDLSASSD-----LEYIYEFVTLRDILLDSNFRGGAIQVVNSLRTSIDNCYITHFTT 166
           G++IDLS SS+       Y +EF+TL+++LLDSNFRGG I V+NSLRT+IDNCYITHFTT
Sbjct: 150 GYIIDLSPSSNGRNSLPSYNFEFITLKELLLDSNFRGGGISVINSLRTNIDNCYITHFTT 209

Query: 167 TGIKVQGGHETYIRNCYLGQHITAGADPGEKDFSGTAIILGGNDNAVTDVVIFSAATGIV 346
            GI VQ GHETYIRN +LGQHITAG D  E++FSGT I L GNDNAVTDVVIFSAA GI+
Sbjct: 210 NGILVQSGHETYIRNSFLGQHITAGGDKNERNFSGTGITLQGNDNAVTDVVIFSAAIGIM 269

Query: 347 IEGQANTLSGVHCYNKATSFGGVGVYIKVPGLTQTRIVNCYLDYTGIVAEDPVQLHISSS 526
           + GQAN  SGVHCYNKAT FGG G+Y+K+PGLTQTRIVN Y+DYT IVAEDPVQLHISSS
Sbjct: 270 VTGQANAFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHISSS 329

Query: 527 FFLGDAFVLLRSINGVANGVNIVDNMFSGSDKGIDIVQLDERNCKFKDVKQVIVDRNNAK 706
           FFLGDA ++L+S NG+ NGV+IVDNMFSGS++G++IVQLD+ N  F+ + QVIVDRN A+
Sbjct: 330 FFLGDANIVLKSKNGIVNGVDIVDNMFSGSNQGVEIVQLDQSNSPFQQIDQVIVDRNIAR 389

Query: 707 GMSVKSTIARGTVEGNDSSWKVDLSRELLFPNLVKSVQY 823
           GM +K+T+A+ +++GN +SW VD +  LLFPNL+K+VQY
Sbjct: 390 GMKLKATVAKMSMQGNGTSWSVDFNNVLLFPNLIKNVQY 428


>ref|XP_003631194.1| PREDICTED: polygalacturonase QRT3-like [Vitis vinifera]
          Length = 505

 Score =  396 bits (1018), Expect = e-108
 Identities = 186/293 (63%), Positives = 233/293 (79%), Gaps = 19/293 (6%)
 Frame = +2

Query: 2    GFLIDLSASSDLE-------------------YIYEFVTLRDILLDSNFRGGAIQVVNSL 124
            G+LIDLS+SS  +                   Y YEF++LRD++LDSN+RGG I V+NSL
Sbjct: 172  GYLIDLSSSSSNQKKENNQTTVADQLISSSSTYNYEFISLRDLMLDSNYRGGGIAVINSL 231

Query: 125  RTSIDNCYITHFTTTGIKVQGGHETYIRNCYLGQHITAGADPGEKDFSGTAIILGGNDNA 304
            RT+IDNCYI HF TTGI +QGGHET + + +LGQHITAG DPGE+ FSGTAI + GNDNA
Sbjct: 232  RTTIDNCYIAHFNTTGILIQGGHETLVHSSFLGQHITAGGDPGERSFSGTAINIVGNDNA 291

Query: 305  VTDVVIFSAATGIVIEGQANTLSGVHCYNKATSFGGVGVYIKVPGLTQTRIVNCYLDYTG 484
            +TDVVI+SAA G+++ GQANTLSGVHCYNKAT FGG G+Y+K+P LTQTRIVNCYLDYTG
Sbjct: 292  ITDVVIYSAAVGVMVSGQANTLSGVHCYNKATGFGGTGIYLKLPSLTQTRIVNCYLDYTG 351

Query: 485  IVAEDPVQLHISSSFFLGDAFVLLRSINGVANGVNIVDNMFSGSDKGIDIVQLDERNCKF 664
            IVAEDPVQLHISSSFFLGDA+++ +SINGVA GV++V NMFSGS KG++IVQLD++N  F
Sbjct: 352  IVAEDPVQLHISSSFFLGDAYIVFKSINGVARGVSVVGNMFSGSGKGVEIVQLDQKNGPF 411

Query: 665  KDVKQVIVDRNNAKGMSVKSTIARGTVEGNDSSWKVDLSRELLFPNLVKSVQY 823
            K++ QV+VD NN  GM V++T+ R + +GN +SW +D +  LLFPN ++ VQY
Sbjct: 412  KEIDQVVVDGNNVNGMKVRATVGRDSTQGNGTSWSIDFNPILLFPNHIRHVQY 464


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