BLASTX nr result

ID: Bupleurum21_contig00032248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032248
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39748.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   171   7e-41
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]   171   7e-41
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PAR...   158   5e-37

>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/95 (83%), Positives = 86/95 (90%)
 Frame = -2

Query: 287 TFALKNVTKYNFDSALVDLRRHIRAADFVAIDLEMTGITSAPWRESYEFDRFDIRYLKVK 108
           TFALKNVTK NF+S+L DLRRH+R ADFVAIDLEMTG+TSAPWRES+EFDRFD++YLKVK
Sbjct: 37  TFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVK 96

Query: 107 DSANKFAVVQLGVCPFRWDPSISSFVAHPHNFYVF 3
           DSA KFAVVQ GVCPFRWD S   FVAHPHNFYVF
Sbjct: 97  DSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVF 131


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/95 (83%), Positives = 86/95 (90%)
 Frame = -2

Query: 287 TFALKNVTKYNFDSALVDLRRHIRAADFVAIDLEMTGITSAPWRESYEFDRFDIRYLKVK 108
           TFALKNVTK NF+S+L DLRRH+R ADFVAIDLEMTG+TSAPWRES+EFDRFD++YLKVK
Sbjct: 37  TFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVK 96

Query: 107 DSANKFAVVQLGVCPFRWDPSISSFVAHPHNFYVF 3
           DSA KFAVVQ GVCPFRWD S   FVAHPHNFYVF
Sbjct: 97  DSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVF 131


>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
          Length = 720

 Score =  171 bits (432), Expect = 7e-41
 Identities = 79/95 (83%), Positives = 86/95 (90%)
 Frame = -2

Query: 287 TFALKNVTKYNFDSALVDLRRHIRAADFVAIDLEMTGITSAPWRESYEFDRFDIRYLKVK 108
           TFALKNVTK NF+S+L DLRRH+R ADFVAIDLEMTG+TSAPWRES+EFDRFD++YLKVK
Sbjct: 37  TFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQYLKVK 96

Query: 107 DSANKFAVVQLGVCPFRWDPSISSFVAHPHNFYVF 3
           DSA KFAVVQ GVCPFRWD S   FVAHPHNFYVF
Sbjct: 97  DSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVF 131


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  162 bits (411), Expect = 2e-38
 Identities = 74/108 (68%), Positives = 91/108 (84%)
 Frame = -2

Query: 326 TLIRRRFXXXXXSTFALKNVTKYNFDSALVDLRRHIRAADFVAIDLEMTGITSAPWRESY 147
           T + R +     S+F LK+VT+ NF++A+ DL+ H++AADFVAIDLEMTG+TSAPWRES 
Sbjct: 11  TALSRAYYCTFSSSFPLKHVTQSNFETAVADLKTHLKAADFVAIDLEMTGVTSAPWRESL 70

Query: 146 EFDRFDIRYLKVKDSANKFAVVQLGVCPFRWDPSISSFVAHPHNFYVF 3
           EFDRFD++YLKVKDSA KFAVVQLGVCPFRWDP   SF+AHPHNF++F
Sbjct: 71  EFDRFDVKYLKVKDSAEKFAVVQLGVCPFRWDPLRLSFIAHPHNFFIF 118


>ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus] gi|449524565|ref|XP_004169292.1| PREDICTED:
           poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus]
          Length = 700

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/95 (74%), Positives = 84/95 (88%)
 Frame = -2

Query: 287 TFALKNVTKYNFDSALVDLRRHIRAADFVAIDLEMTGITSAPWRESYEFDRFDIRYLKVK 108
           +F LKNVTK NF++AL +LR H+RAADFVAIDLEMTGITSAPWR+  EFDRFD+RYL VK
Sbjct: 38  SFPLKNVTKSNFEAALSELRSHVRAADFVAIDLEMTGITSAPWRDLLEFDRFDVRYLNVK 97

Query: 107 DSANKFAVVQLGVCPFRWDPSISSFVAHPHNFYVF 3
           DSA KFAV+Q G+CPFRWD + +SFVAHPHNF++F
Sbjct: 98  DSAEKFAVLQFGICPFRWDSAKNSFVAHPHNFFIF 132


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