BLASTX nr result
ID: Bupleurum21_contig00032239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00032239 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257... 99 1e-28 ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like... 104 1e-28 ref|XP_002518251.1| conserved hypothetical protein [Ricinus comm... 100 5e-28 ref|XP_002891556.1| hypothetical protein ARALYDRAFT_891939 [Arab... 100 2e-27 ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] ... 100 2e-27 >ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera] gi|297737934|emb|CBI27135.3| unnamed protein product [Vitis vinifera] Length = 552 Score = 98.6 bits (244), Expect(2) = 1e-28 Identities = 45/80 (56%), Positives = 60/80 (75%), Gaps = 8/80 (10%) Frame = -1 Query: 356 FEIKGIERLDTQWFTTPRP--------GEYVFMESSISSLVSNQIISSGATKTFVVRTLL 201 FEIKGIE+LD+QW+ T +P GE+ F++ + S+VSNQI+S+GA KT+V RT L Sbjct: 87 FEIKGIEKLDSQWYATQKPLPGSKQRRGEHTFLDCATPSIVSNQIVSAGAVKTYVARTEL 146 Query: 200 PNIIPPSYRGGAIRYLYYVK 141 P+I+PPSYRG IRY YYV+ Sbjct: 147 PSIVPPSYRGATIRYFYYVR 166 Score = 53.1 bits (126), Expect(2) = 1e-28 Identities = 23/45 (51%), Positives = 35/45 (77%) Frame = -3 Query: 135 ISGQYLILENGQFAGESIRDVSQLVARIPVQLWIPQKINGLLYED 1 +SG++L+LENG ES +D+ +L ARIP+Q+W+ QK +GLL E+ Sbjct: 169 LSGRWLVLENGHSPRESRKDLIELEARIPLQIWVTQKTSGLLIEE 213 >ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi transport protein RGP1-like protein [Medicago truncatula] Length = 529 Score = 104 bits (259), Expect(2) = 1e-28 Identities = 50/81 (61%), Positives = 65/81 (80%), Gaps = 8/81 (9%) Frame = -1 Query: 356 FEIKGIERLDTQWFTTPRP--------GEYVFMESSISSLVSNQIISSGATKTFVVRTLL 201 FEI+GIE+LDTQWF T +P GE+VF++SS LV+NQII++G +K++VVRT+L Sbjct: 68 FEIRGIEKLDTQWFATQKPLPGSRQRRGEHVFVDSSTPILVANQIINAGTSKSYVVRTML 127 Query: 200 PNIIPPSYRGGAIRYLYYVKS 138 P+IIPPSY+G IRYLYYVKS Sbjct: 128 PSIIPPSYKGSNIRYLYYVKS 148 Score = 47.4 bits (111), Expect(2) = 1e-28 Identities = 22/45 (48%), Positives = 30/45 (66%) Frame = -3 Query: 135 ISGQYLILENGQFAGESIRDVSQLVARIPVQLWIPQKINGLLYED 1 I+G +LILENGQ E DV+ L RIP+Q+W+ QK +G +D Sbjct: 150 ITGGWLILENGQSRTEPTNDVTDLEVRIPLQIWVNQKSSGFPLDD 194 >ref|XP_002518251.1| conserved hypothetical protein [Ricinus communis] gi|223542598|gb|EEF44137.1| conserved hypothetical protein [Ricinus communis] Length = 528 Score = 100 bits (250), Expect(2) = 5e-28 Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 8/80 (10%) Frame = -1 Query: 356 FEIKGIERLDTQWFTTPRP--------GEYVFMESSISSLVSNQIISSGATKTFVVRTLL 201 FEIKGIE+LD QWF+T +P GE+VFM SSI SLVSNQI+SS A+K++VVR L Sbjct: 84 FEIKGIEKLDPQWFSTHKPLPGSAHSRGEHVFMVSSIPSLVSNQILSSAASKSYVVRVEL 143 Query: 200 PNIIPPSYRGGAIRYLYYVK 141 P+I+PP++RG IRY YYVK Sbjct: 144 PSILPPTFRGSTIRYFYYVK 163 Score = 48.5 bits (114), Expect(2) = 5e-28 Identities = 21/45 (46%), Positives = 32/45 (71%) Frame = -3 Query: 135 ISGQYLILENGQFAGESIRDVSQLVARIPVQLWIPQKINGLLYED 1 + G++L LENG ES +D+ +L AR+P+ +W+ QK NGLL E+ Sbjct: 166 LCGRWLTLENGHSHRESSKDLIELDARVPLNIWVTQKSNGLLMEE 210 >ref|XP_002891556.1| hypothetical protein ARALYDRAFT_891939 [Arabidopsis lyrata subsp. lyrata] gi|297337398|gb|EFH67815.1| hypothetical protein ARALYDRAFT_891939 [Arabidopsis lyrata subsp. lyrata] Length = 527 Score = 100 bits (248), Expect(2) = 2e-27 Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 8/81 (9%) Frame = -1 Query: 356 FEIKGIERLDTQWFTTPRP--------GEYVFMESSISSLVSNQIISSGATKTFVVRTLL 201 FE+KG+E+LD QWF+T +P GE++F++SS SL+SNQI+S GA T +VR +L Sbjct: 67 FEVKGLEKLDIQWFSTQKPSPGSKGRRGEHIFLDSSTPSLISNQILSPGAKMTLMVRAIL 126 Query: 200 PNIIPPSYRGGAIRYLYYVKS 138 P IIPPSY+G +RYLYY+KS Sbjct: 127 PQIIPPSYKGATLRYLYYIKS 147 Score = 47.4 bits (111), Expect(2) = 2e-27 Identities = 20/45 (44%), Positives = 32/45 (71%) Frame = -3 Query: 135 ISGQYLILENGQFAGESIRDVSQLVARIPVQLWIPQKINGLLYED 1 + G+++ LEN QF +S +D ++ RIP+Q+W+ QK NGLL E+ Sbjct: 149 LCGRWMALENSQFYKDSTKDFIEVETRIPLQVWVIQKNNGLLLEE 193 >ref|NP_175432.2| uncharacterized protein [Arabidopsis thaliana] gi|20268711|gb|AAM14059.1| unknown protein [Arabidopsis thaliana] gi|21689887|gb|AAM67504.1| unknown protein [Arabidopsis thaliana] gi|332194396|gb|AEE32517.1| uncharacterized protein [Arabidopsis thaliana] Length = 532 Score = 100 bits (248), Expect(2) = 2e-27 Identities = 45/81 (55%), Positives = 61/81 (75%), Gaps = 8/81 (9%) Frame = -1 Query: 356 FEIKGIERLDTQWFTTPRP--------GEYVFMESSISSLVSNQIISSGATKTFVVRTLL 201 FE+KG+E+LD QWF+T +P GE++F++SS SL+SNQI+S GA T +VR +L Sbjct: 72 FEVKGLEKLDIQWFSTQKPSPGSKGRRGEHIFLDSSTPSLISNQILSPGAKMTLMVRAIL 131 Query: 200 PNIIPPSYRGGAIRYLYYVKS 138 P IIPPSY+G +RYLYY+KS Sbjct: 132 PQIIPPSYKGATLRYLYYIKS 152 Score = 47.0 bits (110), Expect(2) = 2e-27 Identities = 20/45 (44%), Positives = 32/45 (71%) Frame = -3 Query: 135 ISGQYLILENGQFAGESIRDVSQLVARIPVQLWIPQKINGLLYED 1 + G+++ LEN QF +S +D ++ RIP+Q+W+ QK NGLL E+ Sbjct: 154 LCGRWMALENSQFYKDSTQDFIEVETRIPLQVWVIQKNNGLLLEE 198