BLASTX nr result

ID: Bupleurum21_contig00032220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032220
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   119   3e-25
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   119   3e-25
ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_004146117.1| PREDICTED: transmembrane protein 45B-like is...   106   2e-21

>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like
           [Vitis vinifera]
          Length = 278

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = +3

Query: 3   QGLWFYQSAFTLYGPSMPDGCRLKENMISCISGDHEIRGQLLANFQLFSIVFGLMVGVAG 182
           QGLWFYQ+AFTLYGP MP+GCRLKENMISC S ++++RG+LLANFQLF I FG++V V G
Sbjct: 192 QGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFIIAFGVLVAVVG 251

Query: 183 TYGLAAKRYGQVEIRS 230
           +YG AA R+G  ++RS
Sbjct: 252 SYGFAASRFGHPDLRS 267


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  119 bits (297), Expect = 3e-25
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = +3

Query: 3   QGLWFYQSAFTLYGPSMPDGCRLKENMISCISGDHEIRGQLLANFQLFSIVFGLMVGVAG 182
           QGLWFYQ+AFTLYGP MP+GCRLKENMISC S ++++RG+LLANFQLF I FG++V V G
Sbjct: 192 QGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFIIAFGVLVAVVG 251

Query: 183 TYGLAAKRYGQVEIRS 230
           +YG AA R+G  ++RS
Sbjct: 252 SYGFAASRFGHPDLRS 267


>ref|XP_002303462.1| predicted protein [Populus trichocarpa] gi|222840894|gb|EEE78441.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/76 (64%), Positives = 62/76 (81%)
 Frame = +3

Query: 3   QGLWFYQSAFTLYGPSMPDGCRLKENMISCISGDHEIRGQLLANFQLFSIVFGLMVGVAG 182
           QGLWFYQ+AFTLYGP MP+GC+LK + I C S D  +RG+LLANFQLFS+VFG++V VA 
Sbjct: 192 QGLWFYQTAFTLYGPMMPNGCQLKGDQIVCRSSDSLVRGELLANFQLFSLVFGVLVTVAA 251

Query: 183 TYGLAAKRYGQVEIRS 230
           +YG AA RYG  +++S
Sbjct: 252 SYGFAASRYGHSDLKS 267


>ref|XP_002326579.1| predicted protein [Populus trichocarpa] gi|222833901|gb|EEE72378.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/74 (64%), Positives = 58/74 (78%)
 Frame = +3

Query: 3   QGLWFYQSAFTLYGPSMPDGCRLKENMISCISGDHEIRGQLLANFQLFSIVFGLMVGVAG 182
           QGLWFYQ+AF LYGP MPDGC+LK N I C S + +IRG+LLA FQLFS+VFG++V VA 
Sbjct: 192 QGLWFYQTAFCLYGPMMPDGCQLKGNQIMCRSSESQIRGELLATFQLFSMVFGVLVAVAA 251

Query: 183 TYGLAAKRYGQVEI 224
            YG AA RYG  ++
Sbjct: 252 AYGFAASRYGHSDL 265


>ref|XP_004146117.1| PREDICTED: transmembrane protein 45B-like isoform 1 [Cucumis
           sativus] gi|449456763|ref|XP_004146118.1| PREDICTED:
           transmembrane protein 45B-like isoform 2 [Cucumis
           sativus] gi|449509522|ref|XP_004163613.1| PREDICTED:
           transmembrane protein 45B-like [Cucumis sativus]
          Length = 274

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/78 (62%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   QGLWFYQSAFTLYGPSMPDGCRLKENM-ISCISGDHEIRGQLLANFQLFSIVFGLMVGVA 179
           QGLWFYQ+AFTLYGP MPDGC LK++M + C S D E+RG+LLANFQLFS+V G++ GV 
Sbjct: 192 QGLWFYQTAFTLYGPMMPDGCELKDDMMVMCYSKDSEVRGELLANFQLFSMVVGVLGGVI 251

Query: 180 GTYGLAAKRYGQVEIRSS 233
           G Y  AA +YG+ ++ SS
Sbjct: 252 GVYWFAASKYGRSDLGSS 269


Top