BLASTX nr result
ID: Bupleurum21_contig00032209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00032209
(421 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 207 9e-52
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,... 198 4e-49
ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-47
ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-47
ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|2... 189 2e-46
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 207 bits (526), Expect = 9e-52
Identities = 95/137 (69%), Positives = 119/137 (86%)
Frame = +3
Query: 6 NTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMR 185
NTFVGG+LVEMYSKC+D K+AQ++F VTERD ATWN LISGY+ CNQ++NIQ +Q+M+
Sbjct: 311 NTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMK 370
Query: 186 KEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATLE 365
+GFEPNVYTWNGII+GHVEN +E+AL +F++M S+L+PDIYTVG I+P+C+RLAT+
Sbjct: 371 GDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIA 430
Query: 366 RGKQVHAHSIRFGYESD 416
RGKQVHAHSIR GYE D
Sbjct: 431 RGKQVHAHSIRQGYELD 447
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/118 (27%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 45 KCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMRKEGFEPNVYTWNG 224
+C D SA F + +++ ++N +I GY ++ + +M G + +WN
Sbjct: 189 RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNS 246
Query: 225 IIAGHVENDRHEMALDMFSQM-HNSNLQPDIYTVGTIIPSCSRLATLERGKQVHAHSI 395
+I+G+ +N + AL MF + ++ D +T+G+++ +C+ +A+L RGK+VHA ++
Sbjct: 247 MISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAV 304
>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 758
Score = 198 bits (503), Expect = 4e-49
Identities = 89/138 (64%), Positives = 116/138 (84%)
Frame = +3
Query: 3 SNTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEM 182
SNTFVGG+L+EMYSKCQDP +AQ+ F EV ERD TWN LIS Y+ CNQ + I+ LQ+M
Sbjct: 316 SNTFVGGALIEMYSKCQDPMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKM 375
Query: 183 RKEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATL 362
+++GFEPN+YTWNGI+AG+VEN ++A+ +FS+MH +++PDI+TVG I+P+CS+LATL
Sbjct: 376 QEDGFEPNIYTWNGILAGYVENGHLDLAMQLFSEMHTGDVRPDIFTVGIILPACSKLATL 435
Query: 363 ERGKQVHAHSIRFGYESD 416
ERGKQVHAHSIR Y+SD
Sbjct: 436 ERGKQVHAHSIRCYYDSD 453
Score = 74.7 bits (182), Expect = 7e-12
Identities = 32/117 (27%), Positives = 67/117 (57%)
Frame = +3
Query: 45 KCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMRKEGFEPNVYTWNG 224
+C D +A F + R+ ++N +I GY + + +M G + +WN
Sbjct: 194 RCGDMDNAVKIFSRFSLRNEVSYNTMIVGYCAIGDVSKAKEFFDQMEVSGVKRERISWNS 253
Query: 225 IIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATLERGKQVHAHSI 395
+I+G+V+N + AL+MF + ++PD +T+G+++ +C+ A+L +GK++H+++I
Sbjct: 254 MISGYVDNFMFDEALNMFRNLLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAI 310
>ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 192 bits (488), Expect = 2e-47
Identities = 88/138 (63%), Positives = 118/138 (85%)
Frame = +3
Query: 3 SNTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEM 182
SN+ VGG+LVEMYSKCQD +AQ++F V+ERD+ TWNALISGY+ CNQ + I+ Q+M
Sbjct: 302 SNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKM 361
Query: 183 RKEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATL 362
R++GFEPNVYTWNGIIAG+VEN +++ A+ +F++M +NL+PDIYTVG I+ +CSRLAT+
Sbjct: 362 RRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATI 421
Query: 363 ERGKQVHAHSIRFGYESD 416
+RGKQVHA+SIR G++SD
Sbjct: 422 QRGKQVHAYSIRAGHDSD 439
Score = 75.9 bits (185), Expect = 3e-12
Identities = 34/121 (28%), Positives = 69/121 (57%)
Frame = +3
Query: 54 DPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMRKEGFEPNVYTWNGIIA 233
D KSA F + + A++NA+I+GY + + M +EG + + +WN +I+
Sbjct: 183 DMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMIS 242
Query: 234 GHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATLERGKQVHAHSIRFGYES 413
G+V+ + A +F + ++PD +T+G+++ C+ +A++ RGK+ H+ +I G +S
Sbjct: 243 GYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQS 302
Query: 414 D 416
+
Sbjct: 303 N 303
>ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 192 bits (488), Expect = 2e-47
Identities = 88/138 (63%), Positives = 118/138 (85%)
Frame = +3
Query: 3 SNTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEM 182
SN+ VGG+LVEMYSKCQD +AQ++F V+ERD+ TWNALISGY+ CNQ + I+ Q+M
Sbjct: 302 SNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKM 361
Query: 183 RKEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATL 362
R++GFEPNVYTWNGIIAG+VEN +++ A+ +F++M +NL+PDIYTVG I+ +CSRLAT+
Sbjct: 362 RRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATI 421
Query: 363 ERGKQVHAHSIRFGYESD 416
+RGKQVHA+SIR G++SD
Sbjct: 422 QRGKQVHAYSIRAGHDSD 439
Score = 75.9 bits (185), Expect = 3e-12
Identities = 34/121 (28%), Positives = 69/121 (57%)
Frame = +3
Query: 54 DPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMRKEGFEPNVYTWNGIIA 233
D KSA F + + A++NA+I+GY + + M +EG + + +WN +I+
Sbjct: 183 DMKSAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMIS 242
Query: 234 GHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATLERGKQVHAHSIRFGYES 413
G+V+ + A +F + ++PD +T+G+++ C+ +A++ RGK+ H+ +I G +S
Sbjct: 243 GYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQS 302
Query: 414 D 416
+
Sbjct: 303 N 303
>ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|222858467|gb|EEE96014.1|
predicted protein [Populus trichocarpa]
Length = 852
Score = 189 bits (480), Expect = 2e-46
Identities = 86/138 (62%), Positives = 114/138 (82%)
Frame = +3
Query: 3 SNTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEM 182
S+TFVGG+LVEMYSKCQD +AQ++F EV E+D+ TWNALISGY+ NQI+ IQ L++M
Sbjct: 467 SDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKM 526
Query: 183 RKEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATL 362
+ +G+ PN+YTWN I+AG VEN + ++ + +FS+M S L+PDIYTVG I+P+CSRLATL
Sbjct: 527 KGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATL 586
Query: 363 ERGKQVHAHSIRFGYESD 416
ERGKQ HAHSI+ GY++D
Sbjct: 587 ERGKQAHAHSIKCGYDTD 604
Score = 87.0 bits (214), Expect = 1e-15
Identities = 42/138 (30%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Frame = +3
Query: 6 NTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEMR 185
N +V +L++MY KC A+ ++ ERD TWN++I+ + + L++M+
Sbjct: 194 NIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMK 253
Query: 186 KEGFE-PNVYTWNGIIAGHVENDRHEMALDMFSQMHNSNLQPDIYTVGTIIPSCSRLATL 362
+ PNV +W+ +I G +N E A++M +M L P+ T+ ++P+C+RL L
Sbjct: 254 SLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRL 313
Query: 363 ERGKQVHAHSIRFGYESD 416
+ GKQ+H + R + S+
Sbjct: 314 DLGKQLHGYITRHDFISN 331
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +3
Query: 3 SNTFVGGSLVEMYSKCQDPKSAQISFYEVTERDMATWNALISGYSHCNQIKNIQISLQEM 182
SN V +LV++Y +C D A F + + +++ + N +I GY + + M
Sbjct: 330 SNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCM 389
Query: 183 RKEGFEPNVYTWNGIIAGHVENDRHEMALDMFSQM-HNSNLQPDIYTVGTIIPSCSRLAT 359
G E + +WN II+G+V N + A MF M ++PD +T+G+++ +C+ +
Sbjct: 390 DVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTIS 449
Query: 360 LERGKQVHAHSIRFGYESD 416
L +GK++HA +I G +SD
Sbjct: 450 LRQGKEIHAQAIVKGLQSD 468